Gene : Tp57577_TGAC_v2_gene26412 T. pratense v2
Defline:  (1 of 1) PTHR10357:SF118 - ALPHA-AMYLASE 2-RELATED Genomic Order:  2724
Name:  ? Tp57577_TGAC_v2_gene26412 Secondary Identifier:  ? PAC:35981206
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26412 0.5kb upstream 0.5kb upstream 4895 true Tp57577_TGAC_v2_LG1: 22914823-22919717 Trifolium pratense
Tp57577_TGAC_v2_gene26412 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 22919218-22919717 Trifolium pratense
Tp57577_TGAC_v2_gene26412 0.5kb downstream 0.5kb downstream 4895 true Tp57577_TGAC_v2_LG1: 22914323-22919217 Trifolium pratense
Tp57577_TGAC_v2_gene26412 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 22914323-22914822 Trifolium pratense
Tp57577_TGAC_v2_gene26412 1.0kb upstream 1.0kb upstream 5395 true Tp57577_TGAC_v2_LG1: 22914823-22920217 Trifolium pratense
Tp57577_TGAC_v2_gene26412 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 22919218-22920217 Trifolium pratense
Tp57577_TGAC_v2_gene26412 1.0kb downstream 1.0kb downstream 5395 true Tp57577_TGAC_v2_LG1: 22913823-22919217 Trifolium pratense
Tp57577_TGAC_v2_gene26412 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 22913823-22914822 Trifolium pratense
Tp57577_TGAC_v2_gene26412 2.0kb upstream 2.0kb upstream 6395 true Tp57577_TGAC_v2_LG1: 22914823-22921217 Trifolium pratense
Tp57577_TGAC_v2_gene26412 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 22919218-22921217 Trifolium pratense
Tp57577_TGAC_v2_gene26412 2.0kb downstream 2.0kb downstream 6395 true Tp57577_TGAC_v2_LG1: 22912823-22919217 Trifolium pratense
Tp57577_TGAC_v2_gene26412 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 22912823-22914822 Trifolium pratense
Tp57577_TGAC_v2_gene26412 5.0kb upstream 5.0kb upstream 9395 true Tp57577_TGAC_v2_LG1: 22914823-22924217 Trifolium pratense
Tp57577_TGAC_v2_gene26412 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 22919218-22924217 Trifolium pratense
Tp57577_TGAC_v2_gene26412 5.0kb downstream 5.0kb downstream 9395 true Tp57577_TGAC_v2_LG1: 22909823-22919217 Trifolium pratense
Tp57577_TGAC_v2_gene26412 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 22909823-22914822 Trifolium pratense
Tp57577_TGAC_v2_gene26412 10.0kb upstream 10.0kb upstream 14395 true Tp57577_TGAC_v2_LG1: 22914823-22929217 Trifolium pratense
Tp57577_TGAC_v2_gene26412 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 22919218-22929217 Trifolium pratense
Tp57577_TGAC_v2_gene26412 10.0kb downstream 10.0kb downstream 14395 true Tp57577_TGAC_v2_LG1: 22904823-22919217 Trifolium pratense
Tp57577_TGAC_v2_gene26412 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 22904823-22914822 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303124 5265 Fabidae View MSA
124067606 5270 Rosid View MSA
123751733 5271 Pentapetalae View MSA
122785800 5272 Eudicot View MSA
122050125 5273 Angiosperm View MSA
121348688 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain