Gene : Tp57577_TGAC_v2_gene29194 T. pratense v2
Defline:  (1 of 4) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase Genomic Order:  2012
Name:  ? Tp57577_TGAC_v2_gene29194 Secondary Identifier:  ? PAC:35988867
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRNA-CHARGING-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene29194 0.5kb upstream 0.5kb upstream 8385 true Tp57577_TGAC_v2_LG3: 16451325-16459709 Trifolium pratense
Tp57577_TGAC_v2_gene29194 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 16451325-16451824 Trifolium pratense
Tp57577_TGAC_v2_gene29194 0.5kb downstream 0.5kb downstream 8385 true Tp57577_TGAC_v2_LG3: 16451825-16460209 Trifolium pratense
Tp57577_TGAC_v2_gene29194 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 16459710-16460209 Trifolium pratense
Tp57577_TGAC_v2_gene29194 1.0kb upstream 1.0kb upstream 8885 true Tp57577_TGAC_v2_LG3: 16450825-16459709 Trifolium pratense
Tp57577_TGAC_v2_gene29194 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 16450825-16451824 Trifolium pratense
Tp57577_TGAC_v2_gene29194 1.0kb downstream 1.0kb downstream 8885 true Tp57577_TGAC_v2_LG3: 16451825-16460709 Trifolium pratense
Tp57577_TGAC_v2_gene29194 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 16459710-16460709 Trifolium pratense
Tp57577_TGAC_v2_gene29194 2.0kb upstream 2.0kb upstream 9885 true Tp57577_TGAC_v2_LG3: 16449825-16459709 Trifolium pratense
Tp57577_TGAC_v2_gene29194 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 16449825-16451824 Trifolium pratense
Tp57577_TGAC_v2_gene29194 2.0kb downstream 2.0kb downstream 9885 true Tp57577_TGAC_v2_LG3: 16451825-16461709 Trifolium pratense
Tp57577_TGAC_v2_gene29194 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 16459710-16461709 Trifolium pratense
Tp57577_TGAC_v2_gene29194 5.0kb upstream 5.0kb upstream 12885 true Tp57577_TGAC_v2_LG3: 16446825-16459709 Trifolium pratense
Tp57577_TGAC_v2_gene29194 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 16446825-16451824 Trifolium pratense
Tp57577_TGAC_v2_gene29194 5.0kb downstream 5.0kb downstream 12885 true Tp57577_TGAC_v2_LG3: 16451825-16464709 Trifolium pratense
Tp57577_TGAC_v2_gene29194 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 16459710-16464709 Trifolium pratense
Tp57577_TGAC_v2_gene29194 10.0kb upstream 10.0kb upstream 17885 true Tp57577_TGAC_v2_LG3: 16441825-16459709 Trifolium pratense
Tp57577_TGAC_v2_gene29194 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 16441825-16451824 Trifolium pratense
Tp57577_TGAC_v2_gene29194 10.0kb downstream 10.0kb downstream 17885 true Tp57577_TGAC_v2_LG3: 16451825-16469709 Trifolium pratense
Tp57577_TGAC_v2_gene29194 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 16459710-16469709 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779866 5273 Angiosperm View MSA
122288607 5265 Fabidae View MSA
124073900 5270 Rosid View MSA
123744374 5271 Pentapetalae View MSA
122771051 5272 Eudicot View MSA
121051502 5274 Embryophyte View MSA
123091588 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain