Gene : Tp57577_TGAC_v2_gene27745 T. pratense v2
Defline:  (1 of 4) PTHR33493:SF2 - LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Genomic Order:  3157
Name:  ? Tp57577_TGAC_v2_gene27745 Secondary Identifier:  ? PAC:35979623
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27745 0.5kb upstream 0.5kb upstream 2878 true Tp57577_TGAC_v2_LG1: 27234885-27237762 Trifolium pratense
Tp57577_TGAC_v2_gene27745 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 27237263-27237762 Trifolium pratense
Tp57577_TGAC_v2_gene27745 0.5kb downstream 0.5kb downstream 2878 true Tp57577_TGAC_v2_LG1: 27234385-27237262 Trifolium pratense
Tp57577_TGAC_v2_gene27745 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 27234385-27234884 Trifolium pratense
Tp57577_TGAC_v2_gene27745 1.0kb upstream 1.0kb upstream 3378 true Tp57577_TGAC_v2_LG1: 27234885-27238262 Trifolium pratense
Tp57577_TGAC_v2_gene27745 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 27237263-27238262 Trifolium pratense
Tp57577_TGAC_v2_gene27745 1.0kb downstream 1.0kb downstream 3378 true Tp57577_TGAC_v2_LG1: 27233885-27237262 Trifolium pratense
Tp57577_TGAC_v2_gene27745 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 27233885-27234884 Trifolium pratense
Tp57577_TGAC_v2_gene27745 2.0kb upstream 2.0kb upstream 4378 true Tp57577_TGAC_v2_LG1: 27234885-27239262 Trifolium pratense
Tp57577_TGAC_v2_gene27745 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 27237263-27239262 Trifolium pratense
Tp57577_TGAC_v2_gene27745 2.0kb downstream 2.0kb downstream 4378 true Tp57577_TGAC_v2_LG1: 27232885-27237262 Trifolium pratense
Tp57577_TGAC_v2_gene27745 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 27232885-27234884 Trifolium pratense
Tp57577_TGAC_v2_gene27745 5.0kb upstream 5.0kb upstream 7378 true Tp57577_TGAC_v2_LG1: 27234885-27242262 Trifolium pratense
Tp57577_TGAC_v2_gene27745 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 27237263-27242262 Trifolium pratense
Tp57577_TGAC_v2_gene27745 5.0kb downstream 5.0kb downstream 7378 true Tp57577_TGAC_v2_LG1: 27229885-27237262 Trifolium pratense
Tp57577_TGAC_v2_gene27745 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 27229885-27234884 Trifolium pratense
Tp57577_TGAC_v2_gene27745 10.0kb upstream 10.0kb upstream 12378 true Tp57577_TGAC_v2_LG1: 27234885-27247262 Trifolium pratense
Tp57577_TGAC_v2_gene27745 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 27237263-27247262 Trifolium pratense
Tp57577_TGAC_v2_gene27745 10.0kb downstream 10.0kb downstream 12378 true Tp57577_TGAC_v2_LG1: 27224885-27237262 Trifolium pratense
Tp57577_TGAC_v2_gene27745 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 27224885-27234884 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296727 5265 Fabidae View MSA
124038723 5270 Rosid View MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain