Gene : Tp57577_TGAC_v2_gene16864 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  21
Name:  ? Tp57577_TGAC_v2_gene16864 Secondary Identifier:  ? PAC:35977500
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16864 0.5kb upstream 0.5kb upstream 7182 true Tp57577_TGAC_v2_scaf_259: 157677-164858 Trifolium pratense
Tp57577_TGAC_v2_gene16864 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_259: 164359-164858 Trifolium pratense
Tp57577_TGAC_v2_gene16864 0.5kb downstream 0.5kb downstream 7182 true Tp57577_TGAC_v2_scaf_259: 157177-164358 Trifolium pratense
Tp57577_TGAC_v2_gene16864 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_259: 157177-157676 Trifolium pratense
Tp57577_TGAC_v2_gene16864 1.0kb upstream 1.0kb upstream 7682 true Tp57577_TGAC_v2_scaf_259: 157677-165358 Trifolium pratense
Tp57577_TGAC_v2_gene16864 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_259: 164359-165358 Trifolium pratense
Tp57577_TGAC_v2_gene16864 1.0kb downstream 1.0kb downstream 7682 true Tp57577_TGAC_v2_scaf_259: 156677-164358 Trifolium pratense
Tp57577_TGAC_v2_gene16864 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_259: 156677-157676 Trifolium pratense
Tp57577_TGAC_v2_gene16864 2.0kb upstream 2.0kb upstream 8682 true Tp57577_TGAC_v2_scaf_259: 157677-166358 Trifolium pratense
Tp57577_TGAC_v2_gene16864 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_259: 164359-166358 Trifolium pratense
Tp57577_TGAC_v2_gene16864 2.0kb downstream 2.0kb downstream 8682 true Tp57577_TGAC_v2_scaf_259: 155677-164358 Trifolium pratense
Tp57577_TGAC_v2_gene16864 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_259: 155677-157676 Trifolium pratense
Tp57577_TGAC_v2_gene16864 5.0kb upstream 5.0kb upstream 11682 true Tp57577_TGAC_v2_scaf_259: 157677-169358 Trifolium pratense
Tp57577_TGAC_v2_gene16864 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_259: 164359-169358 Trifolium pratense
Tp57577_TGAC_v2_gene16864 5.0kb downstream 5.0kb downstream 11682 true Tp57577_TGAC_v2_scaf_259: 152677-164358 Trifolium pratense
Tp57577_TGAC_v2_gene16864 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_259: 152677-157676 Trifolium pratense
Tp57577_TGAC_v2_gene16864 10.0kb upstream 10.0kb upstream 16682 true Tp57577_TGAC_v2_scaf_259: 157677-174358 Trifolium pratense
Tp57577_TGAC_v2_gene16864 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_259: 164359-174358 Trifolium pratense
Tp57577_TGAC_v2_gene16864 10.0kb downstream 10.0kb downstream 16682 true Tp57577_TGAC_v2_scaf_259: 147677-164358 Trifolium pratense
Tp57577_TGAC_v2_gene16864 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_259: 147677-157676 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305765 5265 Fabidae View MSA
124067995 5270 Rosid View MSA
123737960 5271 Pentapetalae View MSA
122786713 5272 Eudicot View MSA
122046332 5273 Angiosperm View MSA
121347677 5274 Embryophyte View MSA
123426917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain