Gene : Tp57577_TGAC_v2_gene16877 T. pratense v2
Defline:  (1 of 4) KOG1725 - Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family) Genomic Order:  50
Name:  ? Tp57577_TGAC_v2_gene16877 Secondary Identifier:  ? PAC:35977506
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16877 0.5kb upstream 0.5kb upstream 6171 true Tp57577_TGAC_v2_scaf_259: 302737-308907 Trifolium pratense
Tp57577_TGAC_v2_gene16877 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_259: 308408-308907 Trifolium pratense
Tp57577_TGAC_v2_gene16877 0.5kb downstream 0.5kb downstream 6171 true Tp57577_TGAC_v2_scaf_259: 302237-308407 Trifolium pratense
Tp57577_TGAC_v2_gene16877 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_259: 302237-302736 Trifolium pratense
Tp57577_TGAC_v2_gene16877 1.0kb upstream 1.0kb upstream 6671 true Tp57577_TGAC_v2_scaf_259: 302737-309407 Trifolium pratense
Tp57577_TGAC_v2_gene16877 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_259: 308408-309407 Trifolium pratense
Tp57577_TGAC_v2_gene16877 1.0kb downstream 1.0kb downstream 6671 true Tp57577_TGAC_v2_scaf_259: 301737-308407 Trifolium pratense
Tp57577_TGAC_v2_gene16877 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_259: 301737-302736 Trifolium pratense
Tp57577_TGAC_v2_gene16877 2.0kb upstream 2.0kb upstream 7281 true Tp57577_TGAC_v2_scaf_259: 302737-310017 Trifolium pratense
Tp57577_TGAC_v2_gene16877 2.0kb upstream 2.0kb upstream 1610 false Tp57577_TGAC_v2_scaf_259: 308408-310017 Trifolium pratense
Tp57577_TGAC_v2_gene16877 2.0kb downstream 2.0kb downstream 7671 true Tp57577_TGAC_v2_scaf_259: 300737-308407 Trifolium pratense
Tp57577_TGAC_v2_gene16877 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_259: 300737-302736 Trifolium pratense
Tp57577_TGAC_v2_gene16877 5.0kb upstream 5.0kb upstream 7281 true Tp57577_TGAC_v2_scaf_259: 302737-310017 Trifolium pratense
Tp57577_TGAC_v2_gene16877 5.0kb upstream 5.0kb upstream 1610 false Tp57577_TGAC_v2_scaf_259: 308408-310017 Trifolium pratense
Tp57577_TGAC_v2_gene16877 5.0kb downstream 5.0kb downstream 10671 true Tp57577_TGAC_v2_scaf_259: 297737-308407 Trifolium pratense
Tp57577_TGAC_v2_gene16877 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_259: 297737-302736 Trifolium pratense
Tp57577_TGAC_v2_gene16877 10.0kb upstream 10.0kb upstream 7281 true Tp57577_TGAC_v2_scaf_259: 302737-310017 Trifolium pratense
Tp57577_TGAC_v2_gene16877 10.0kb upstream 10.0kb upstream 1610 false Tp57577_TGAC_v2_scaf_259: 308408-310017 Trifolium pratense
Tp57577_TGAC_v2_gene16877 10.0kb downstream 10.0kb downstream 15671 true Tp57577_TGAC_v2_scaf_259: 292737-308407 Trifolium pratense
Tp57577_TGAC_v2_gene16877 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_259: 292737-302736 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311964 5265 Fabidae View MSA
124074619 5270 Rosid View MSA
123753411 5271 Pentapetalae View MSA
122797924 5272 Eudicot View MSA
122050358 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain