Gene : Tp57577_TGAC_v2_gene27081 T. pratense v2
Defline:  (1 of 8) PTHR31490:SF18 - 1,4-BETA-XYLAN ENDOHYDROLASE-RELATED Genomic Order:  286
Name:  ? Tp57577_TGAC_v2_gene27081 Secondary Identifier:  ? PAC:35981053
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27081 0.5kb upstream 0.5kb upstream 2729 true Tp57577_TGAC_v2_LG1: 2073510-2076238 Trifolium pratense
Tp57577_TGAC_v2_gene27081 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 2075739-2076238 Trifolium pratense
Tp57577_TGAC_v2_gene27081 0.5kb downstream 0.5kb downstream 2729 true Tp57577_TGAC_v2_LG1: 2073010-2075738 Trifolium pratense
Tp57577_TGAC_v2_gene27081 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 2073010-2073509 Trifolium pratense
Tp57577_TGAC_v2_gene27081 1.0kb upstream 1.0kb upstream 3229 true Tp57577_TGAC_v2_LG1: 2073510-2076738 Trifolium pratense
Tp57577_TGAC_v2_gene27081 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 2075739-2076738 Trifolium pratense
Tp57577_TGAC_v2_gene27081 1.0kb downstream 1.0kb downstream 3229 true Tp57577_TGAC_v2_LG1: 2072510-2075738 Trifolium pratense
Tp57577_TGAC_v2_gene27081 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 2072510-2073509 Trifolium pratense
Tp57577_TGAC_v2_gene27081 2.0kb upstream 2.0kb upstream 4229 true Tp57577_TGAC_v2_LG1: 2073510-2077738 Trifolium pratense
Tp57577_TGAC_v2_gene27081 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 2075739-2077738 Trifolium pratense
Tp57577_TGAC_v2_gene27081 2.0kb downstream 2.0kb downstream 4229 true Tp57577_TGAC_v2_LG1: 2071510-2075738 Trifolium pratense
Tp57577_TGAC_v2_gene27081 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 2071510-2073509 Trifolium pratense
Tp57577_TGAC_v2_gene27081 5.0kb upstream 5.0kb upstream 7229 true Tp57577_TGAC_v2_LG1: 2073510-2080738 Trifolium pratense
Tp57577_TGAC_v2_gene27081 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 2075739-2080738 Trifolium pratense
Tp57577_TGAC_v2_gene27081 5.0kb downstream 5.0kb downstream 7229 true Tp57577_TGAC_v2_LG1: 2068510-2075738 Trifolium pratense
Tp57577_TGAC_v2_gene27081 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 2068510-2073509 Trifolium pratense
Tp57577_TGAC_v2_gene27081 10.0kb upstream 10.0kb upstream 12229 true Tp57577_TGAC_v2_LG1: 2073510-2085738 Trifolium pratense
Tp57577_TGAC_v2_gene27081 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 2075739-2085738 Trifolium pratense
Tp57577_TGAC_v2_gene27081 10.0kb downstream 10.0kb downstream 12229 true Tp57577_TGAC_v2_LG1: 2063510-2075738 Trifolium pratense
Tp57577_TGAC_v2_gene27081 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 2063510-2073509 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311948 5265 Fabidae View MSA
124074050 5270 Rosid View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain