Gene : Tp57577_TGAC_v2_gene27080 T. pratense v2
Defline:  (1 of 1) PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Genomic Order:  306
Name:  ? Tp57577_TGAC_v2_gene27080 Secondary Identifier:  ? PAC:35978454
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27080 0.5kb upstream 0.5kb upstream 6541 true Tp57577_TGAC_v2_LG1: 2197578-2204118 Trifolium pratense
Tp57577_TGAC_v2_gene27080 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 2203619-2204118 Trifolium pratense
Tp57577_TGAC_v2_gene27080 0.5kb downstream 0.5kb downstream 6541 true Tp57577_TGAC_v2_LG1: 2197078-2203618 Trifolium pratense
Tp57577_TGAC_v2_gene27080 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 2197078-2197577 Trifolium pratense
Tp57577_TGAC_v2_gene27080 1.0kb upstream 1.0kb upstream 7041 true Tp57577_TGAC_v2_LG1: 2197578-2204618 Trifolium pratense
Tp57577_TGAC_v2_gene27080 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 2203619-2204618 Trifolium pratense
Tp57577_TGAC_v2_gene27080 1.0kb downstream 1.0kb downstream 7041 true Tp57577_TGAC_v2_LG1: 2196578-2203618 Trifolium pratense
Tp57577_TGAC_v2_gene27080 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 2196578-2197577 Trifolium pratense
Tp57577_TGAC_v2_gene27080 2.0kb upstream 2.0kb upstream 8041 true Tp57577_TGAC_v2_LG1: 2197578-2205618 Trifolium pratense
Tp57577_TGAC_v2_gene27080 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 2203619-2205618 Trifolium pratense
Tp57577_TGAC_v2_gene27080 2.0kb downstream 2.0kb downstream 8041 true Tp57577_TGAC_v2_LG1: 2195578-2203618 Trifolium pratense
Tp57577_TGAC_v2_gene27080 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 2195578-2197577 Trifolium pratense
Tp57577_TGAC_v2_gene27080 5.0kb upstream 5.0kb upstream 11041 true Tp57577_TGAC_v2_LG1: 2197578-2208618 Trifolium pratense
Tp57577_TGAC_v2_gene27080 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 2203619-2208618 Trifolium pratense
Tp57577_TGAC_v2_gene27080 5.0kb downstream 5.0kb downstream 11041 true Tp57577_TGAC_v2_LG1: 2192578-2203618 Trifolium pratense
Tp57577_TGAC_v2_gene27080 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 2192578-2197577 Trifolium pratense
Tp57577_TGAC_v2_gene27080 10.0kb upstream 10.0kb upstream 16041 true Tp57577_TGAC_v2_LG1: 2197578-2213618 Trifolium pratense
Tp57577_TGAC_v2_gene27080 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 2203619-2213618 Trifolium pratense
Tp57577_TGAC_v2_gene27080 10.0kb downstream 10.0kb downstream 16041 true Tp57577_TGAC_v2_LG1: 2187578-2203618 Trifolium pratense
Tp57577_TGAC_v2_gene27080 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 2187578-2197577 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300701 5265 Fabidae View MSA
124065184 5270 Rosid View MSA
123747124 5271 Pentapetalae View MSA
122796341 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain