Gene : Tp57577_TGAC_v2_gene27084 T. pratense v2
Defline:  (1 of 4) PF12767 - Transcriptional regulator of RNA polII, SAGA, subunit (SAGA-Tad1) Genomic Order:  307
Name:  ? Tp57577_TGAC_v2_gene27084 Secondary Identifier:  ? PAC:35979691
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27084 0.5kb upstream 0.5kb upstream 2541 true Tp57577_TGAC_v2_LG1: 2220203-2222743 Trifolium pratense
Tp57577_TGAC_v2_gene27084 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 2220203-2220702 Trifolium pratense
Tp57577_TGAC_v2_gene27084 0.5kb downstream 0.5kb downstream 2541 true Tp57577_TGAC_v2_LG1: 2220703-2223243 Trifolium pratense
Tp57577_TGAC_v2_gene27084 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 2222744-2223243 Trifolium pratense
Tp57577_TGAC_v2_gene27084 1.0kb upstream 1.0kb upstream 3041 true Tp57577_TGAC_v2_LG1: 2219703-2222743 Trifolium pratense
Tp57577_TGAC_v2_gene27084 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 2219703-2220702 Trifolium pratense
Tp57577_TGAC_v2_gene27084 1.0kb downstream 1.0kb downstream 3041 true Tp57577_TGAC_v2_LG1: 2220703-2223743 Trifolium pratense
Tp57577_TGAC_v2_gene27084 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 2222744-2223743 Trifolium pratense
Tp57577_TGAC_v2_gene27084 2.0kb upstream 2.0kb upstream 4041 true Tp57577_TGAC_v2_LG1: 2218703-2222743 Trifolium pratense
Tp57577_TGAC_v2_gene27084 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 2218703-2220702 Trifolium pratense
Tp57577_TGAC_v2_gene27084 2.0kb downstream 2.0kb downstream 4041 true Tp57577_TGAC_v2_LG1: 2220703-2224743 Trifolium pratense
Tp57577_TGAC_v2_gene27084 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 2222744-2224743 Trifolium pratense
Tp57577_TGAC_v2_gene27084 5.0kb upstream 5.0kb upstream 7041 true Tp57577_TGAC_v2_LG1: 2215703-2222743 Trifolium pratense
Tp57577_TGAC_v2_gene27084 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 2215703-2220702 Trifolium pratense
Tp57577_TGAC_v2_gene27084 5.0kb downstream 5.0kb downstream 7041 true Tp57577_TGAC_v2_LG1: 2220703-2227743 Trifolium pratense
Tp57577_TGAC_v2_gene27084 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 2222744-2227743 Trifolium pratense
Tp57577_TGAC_v2_gene27084 10.0kb upstream 10.0kb upstream 12041 true Tp57577_TGAC_v2_LG1: 2210703-2222743 Trifolium pratense
Tp57577_TGAC_v2_gene27084 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 2210703-2220702 Trifolium pratense
Tp57577_TGAC_v2_gene27084 10.0kb downstream 10.0kb downstream 12041 true Tp57577_TGAC_v2_LG1: 2220703-2232743 Trifolium pratense
Tp57577_TGAC_v2_gene27084 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 2222744-2232743 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303879 5265 Fabidae View MSA
124060712 5270 Rosid View MSA
123743282 5271 Pentapetalae View MSA
122790089 5272 Eudicot View MSA
122050052 5273 Angiosperm View MSA
121311708 5274 Embryophyte View MSA
123348971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain