Gene : Tp57577_TGAC_v2_gene6780 T. pratense v2
Defline:  (1 of 10) PTHR22835//PTHR22835:SF177 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1055
Name:  ? Tp57577_TGAC_v2_gene6780 Secondary Identifier:  ? PAC:35988580
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LIPAS-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6780 0.5kb upstream 0.5kb upstream 3655 true Tp57577_TGAC_v2_LG3: 7933943-7937597 Trifolium pratense
Tp57577_TGAC_v2_gene6780 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 7937098-7937597 Trifolium pratense
Tp57577_TGAC_v2_gene6780 0.5kb downstream 0.5kb downstream 3655 true Tp57577_TGAC_v2_LG3: 7933443-7937097 Trifolium pratense
Tp57577_TGAC_v2_gene6780 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 7933443-7933942 Trifolium pratense
Tp57577_TGAC_v2_gene6780 1.0kb upstream 1.0kb upstream 4155 true Tp57577_TGAC_v2_LG3: 7933943-7938097 Trifolium pratense
Tp57577_TGAC_v2_gene6780 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 7937098-7938097 Trifolium pratense
Tp57577_TGAC_v2_gene6780 1.0kb downstream 1.0kb downstream 4155 true Tp57577_TGAC_v2_LG3: 7932943-7937097 Trifolium pratense
Tp57577_TGAC_v2_gene6780 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 7932943-7933942 Trifolium pratense
Tp57577_TGAC_v2_gene6780 2.0kb upstream 2.0kb upstream 5155 true Tp57577_TGAC_v2_LG3: 7933943-7939097 Trifolium pratense
Tp57577_TGAC_v2_gene6780 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 7937098-7939097 Trifolium pratense
Tp57577_TGAC_v2_gene6780 2.0kb downstream 2.0kb downstream 5155 true Tp57577_TGAC_v2_LG3: 7931943-7937097 Trifolium pratense
Tp57577_TGAC_v2_gene6780 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 7931943-7933942 Trifolium pratense
Tp57577_TGAC_v2_gene6780 5.0kb upstream 5.0kb upstream 8155 true Tp57577_TGAC_v2_LG3: 7933943-7942097 Trifolium pratense
Tp57577_TGAC_v2_gene6780 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 7937098-7942097 Trifolium pratense
Tp57577_TGAC_v2_gene6780 5.0kb downstream 5.0kb downstream 8155 true Tp57577_TGAC_v2_LG3: 7928943-7937097 Trifolium pratense
Tp57577_TGAC_v2_gene6780 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 7928943-7933942 Trifolium pratense
Tp57577_TGAC_v2_gene6780 10.0kb upstream 10.0kb upstream 13155 true Tp57577_TGAC_v2_LG3: 7933943-7947097 Trifolium pratense
Tp57577_TGAC_v2_gene6780 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 7937098-7947097 Trifolium pratense
Tp57577_TGAC_v2_gene6780 10.0kb downstream 10.0kb downstream 13155 true Tp57577_TGAC_v2_LG3: 7923943-7937097 Trifolium pratense
Tp57577_TGAC_v2_gene6780 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 7923943-7933942 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310381 5265 Fabidae View MSA
124073778 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain