Gene : Tp57577_TGAC_v2_gene7858 T. pratense v2
Defline:  (1 of 3) PF03350 - Uncharacterized protein family, UPF0114 (UPF0114) Genomic Order:  2420
Name:  ? Tp57577_TGAC_v2_gene7858 Secondary Identifier:  ? PAC:35989838
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene7858 0.5kb upstream 0.5kb upstream 3042 true Tp57577_TGAC_v2_LG3: 20395255-20398296 Trifolium pratense
Tp57577_TGAC_v2_gene7858 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 20397797-20398296 Trifolium pratense
Tp57577_TGAC_v2_gene7858 0.5kb downstream 0.5kb downstream 3042 true Tp57577_TGAC_v2_LG3: 20394755-20397796 Trifolium pratense
Tp57577_TGAC_v2_gene7858 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 20394755-20395254 Trifolium pratense
Tp57577_TGAC_v2_gene7858 1.0kb upstream 1.0kb upstream 3542 true Tp57577_TGAC_v2_LG3: 20395255-20398796 Trifolium pratense
Tp57577_TGAC_v2_gene7858 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 20397797-20398796 Trifolium pratense
Tp57577_TGAC_v2_gene7858 1.0kb downstream 1.0kb downstream 3542 true Tp57577_TGAC_v2_LG3: 20394255-20397796 Trifolium pratense
Tp57577_TGAC_v2_gene7858 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 20394255-20395254 Trifolium pratense
Tp57577_TGAC_v2_gene7858 2.0kb upstream 2.0kb upstream 4542 true Tp57577_TGAC_v2_LG3: 20395255-20399796 Trifolium pratense
Tp57577_TGAC_v2_gene7858 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 20397797-20399796 Trifolium pratense
Tp57577_TGAC_v2_gene7858 2.0kb downstream 2.0kb downstream 4542 true Tp57577_TGAC_v2_LG3: 20393255-20397796 Trifolium pratense
Tp57577_TGAC_v2_gene7858 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 20393255-20395254 Trifolium pratense
Tp57577_TGAC_v2_gene7858 5.0kb upstream 5.0kb upstream 7542 true Tp57577_TGAC_v2_LG3: 20395255-20402796 Trifolium pratense
Tp57577_TGAC_v2_gene7858 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 20397797-20402796 Trifolium pratense
Tp57577_TGAC_v2_gene7858 5.0kb downstream 5.0kb downstream 7542 true Tp57577_TGAC_v2_LG3: 20390255-20397796 Trifolium pratense
Tp57577_TGAC_v2_gene7858 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 20390255-20395254 Trifolium pratense
Tp57577_TGAC_v2_gene7858 10.0kb upstream 10.0kb upstream 12542 true Tp57577_TGAC_v2_LG3: 20395255-20407796 Trifolium pratense
Tp57577_TGAC_v2_gene7858 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 20397797-20407796 Trifolium pratense
Tp57577_TGAC_v2_gene7858 10.0kb downstream 10.0kb downstream 12542 true Tp57577_TGAC_v2_LG3: 20385255-20397796 Trifolium pratense
Tp57577_TGAC_v2_gene7858 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 20385255-20395254 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303179 5265 Fabidae View MSA
124061813 5270 Rosid View MSA
123738693 5271 Pentapetalae View MSA
122789368 5272 Eudicot View MSA
122048009 5273 Angiosperm View MSA
121348495 5274 Embryophyte View MSA
123426050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain