Gene : Tp57577_TGAC_v2_gene27096 T. pratense v2
Defline:  (1 of 18) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  318
Name:  ? Tp57577_TGAC_v2_gene27096 Secondary Identifier:  ? PAC:35979967
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27096 0.5kb upstream 0.5kb upstream 3606 true Tp57577_TGAC_v2_LG1: 2286573-2290178 Trifolium pratense
Tp57577_TGAC_v2_gene27096 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 2289679-2290178 Trifolium pratense
Tp57577_TGAC_v2_gene27096 0.5kb downstream 0.5kb downstream 3606 true Tp57577_TGAC_v2_LG1: 2286073-2289678 Trifolium pratense
Tp57577_TGAC_v2_gene27096 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 2286073-2286572 Trifolium pratense
Tp57577_TGAC_v2_gene27096 1.0kb upstream 1.0kb upstream 4106 true Tp57577_TGAC_v2_LG1: 2286573-2290678 Trifolium pratense
Tp57577_TGAC_v2_gene27096 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 2289679-2290678 Trifolium pratense
Tp57577_TGAC_v2_gene27096 1.0kb downstream 1.0kb downstream 4106 true Tp57577_TGAC_v2_LG1: 2285573-2289678 Trifolium pratense
Tp57577_TGAC_v2_gene27096 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 2285573-2286572 Trifolium pratense
Tp57577_TGAC_v2_gene27096 2.0kb upstream 2.0kb upstream 5106 true Tp57577_TGAC_v2_LG1: 2286573-2291678 Trifolium pratense
Tp57577_TGAC_v2_gene27096 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 2289679-2291678 Trifolium pratense
Tp57577_TGAC_v2_gene27096 2.0kb downstream 2.0kb downstream 5106 true Tp57577_TGAC_v2_LG1: 2284573-2289678 Trifolium pratense
Tp57577_TGAC_v2_gene27096 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 2284573-2286572 Trifolium pratense
Tp57577_TGAC_v2_gene27096 5.0kb upstream 5.0kb upstream 8106 true Tp57577_TGAC_v2_LG1: 2286573-2294678 Trifolium pratense
Tp57577_TGAC_v2_gene27096 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 2289679-2294678 Trifolium pratense
Tp57577_TGAC_v2_gene27096 5.0kb downstream 5.0kb downstream 8106 true Tp57577_TGAC_v2_LG1: 2281573-2289678 Trifolium pratense
Tp57577_TGAC_v2_gene27096 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 2281573-2286572 Trifolium pratense
Tp57577_TGAC_v2_gene27096 10.0kb upstream 10.0kb upstream 13106 true Tp57577_TGAC_v2_LG1: 2286573-2299678 Trifolium pratense
Tp57577_TGAC_v2_gene27096 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 2289679-2299678 Trifolium pratense
Tp57577_TGAC_v2_gene27096 10.0kb downstream 10.0kb downstream 13106 true Tp57577_TGAC_v2_LG1: 2276573-2289678 Trifolium pratense
Tp57577_TGAC_v2_gene27096 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 2276573-2286572 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299033 5265 Fabidae View MSA
124061371 5270 Rosid View MSA
123742255 5271 Pentapetalae View MSA
122789434 5272 Eudicot View MSA
122043427 5273 Angiosperm View MSA
121310121 5274 Embryophyte View MSA
123347696 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain