Gene : Tp57577_TGAC_v2_gene27088 T. pratense v2
Defline:  (1 of 2) PTHR21737:SF4 - CACTIN Genomic Order:  330
Name:  ? Tp57577_TGAC_v2_gene27088 Secondary Identifier:  ? PAC:35979489
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27088 0.5kb upstream 0.5kb upstream 9738 true Tp57577_TGAC_v2_LG1: 2368309-2378046 Trifolium pratense
Tp57577_TGAC_v2_gene27088 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 2377547-2378046 Trifolium pratense
Tp57577_TGAC_v2_gene27088 0.5kb downstream 0.5kb downstream 9738 true Tp57577_TGAC_v2_LG1: 2367809-2377546 Trifolium pratense
Tp57577_TGAC_v2_gene27088 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 2367809-2368308 Trifolium pratense
Tp57577_TGAC_v2_gene27088 1.0kb upstream 1.0kb upstream 10238 true Tp57577_TGAC_v2_LG1: 2368309-2378546 Trifolium pratense
Tp57577_TGAC_v2_gene27088 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 2377547-2378546 Trifolium pratense
Tp57577_TGAC_v2_gene27088 1.0kb downstream 1.0kb downstream 10238 true Tp57577_TGAC_v2_LG1: 2367309-2377546 Trifolium pratense
Tp57577_TGAC_v2_gene27088 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 2367309-2368308 Trifolium pratense
Tp57577_TGAC_v2_gene27088 2.0kb upstream 2.0kb upstream 11238 true Tp57577_TGAC_v2_LG1: 2368309-2379546 Trifolium pratense
Tp57577_TGAC_v2_gene27088 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 2377547-2379546 Trifolium pratense
Tp57577_TGAC_v2_gene27088 2.0kb downstream 2.0kb downstream 11238 true Tp57577_TGAC_v2_LG1: 2366309-2377546 Trifolium pratense
Tp57577_TGAC_v2_gene27088 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 2366309-2368308 Trifolium pratense
Tp57577_TGAC_v2_gene27088 5.0kb upstream 5.0kb upstream 14238 true Tp57577_TGAC_v2_LG1: 2368309-2382546 Trifolium pratense
Tp57577_TGAC_v2_gene27088 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 2377547-2382546 Trifolium pratense
Tp57577_TGAC_v2_gene27088 5.0kb downstream 5.0kb downstream 14238 true Tp57577_TGAC_v2_LG1: 2363309-2377546 Trifolium pratense
Tp57577_TGAC_v2_gene27088 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 2363309-2368308 Trifolium pratense
Tp57577_TGAC_v2_gene27088 10.0kb upstream 10.0kb upstream 19238 true Tp57577_TGAC_v2_LG1: 2368309-2387546 Trifolium pratense
Tp57577_TGAC_v2_gene27088 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 2377547-2387546 Trifolium pratense
Tp57577_TGAC_v2_gene27088 10.0kb downstream 10.0kb downstream 19238 true Tp57577_TGAC_v2_LG1: 2358309-2377546 Trifolium pratense
Tp57577_TGAC_v2_gene27088 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 2358309-2368308 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311471 5265 Fabidae View MSA
124062313 5270 Rosid View MSA
123746898 5271 Pentapetalae View MSA
122792655 5272 Eudicot View MSA
122043327 5273 Angiosperm View MSA
121346365 5274 Embryophyte View MSA
123428349 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain