Gene : Tp57577_TGAC_v2_gene6757 T. pratense v2
Defline:  (1 of 8) KOG0446 - Vacuolar sorting protein VPS1, dynamin, and related proteins Genomic Order:  1046
Name:  ? Tp57577_TGAC_v2_gene6757 Secondary Identifier:  ? PAC:35990244
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6757 0.5kb upstream 0.5kb upstream 4689 true Tp57577_TGAC_v2_LG3: 7878589-7883277 Trifolium pratense
Tp57577_TGAC_v2_gene6757 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 7882778-7883277 Trifolium pratense
Tp57577_TGAC_v2_gene6757 0.5kb downstream 0.5kb downstream 4689 true Tp57577_TGAC_v2_LG3: 7878089-7882777 Trifolium pratense
Tp57577_TGAC_v2_gene6757 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 7878089-7878588 Trifolium pratense
Tp57577_TGAC_v2_gene6757 1.0kb upstream 1.0kb upstream 5189 true Tp57577_TGAC_v2_LG3: 7878589-7883777 Trifolium pratense
Tp57577_TGAC_v2_gene6757 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 7882778-7883777 Trifolium pratense
Tp57577_TGAC_v2_gene6757 1.0kb downstream 1.0kb downstream 5189 true Tp57577_TGAC_v2_LG3: 7877589-7882777 Trifolium pratense
Tp57577_TGAC_v2_gene6757 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 7877589-7878588 Trifolium pratense
Tp57577_TGAC_v2_gene6757 2.0kb upstream 2.0kb upstream 6189 true Tp57577_TGAC_v2_LG3: 7878589-7884777 Trifolium pratense
Tp57577_TGAC_v2_gene6757 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 7882778-7884777 Trifolium pratense
Tp57577_TGAC_v2_gene6757 2.0kb downstream 2.0kb downstream 6189 true Tp57577_TGAC_v2_LG3: 7876589-7882777 Trifolium pratense
Tp57577_TGAC_v2_gene6757 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 7876589-7878588 Trifolium pratense
Tp57577_TGAC_v2_gene6757 5.0kb upstream 5.0kb upstream 9189 true Tp57577_TGAC_v2_LG3: 7878589-7887777 Trifolium pratense
Tp57577_TGAC_v2_gene6757 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 7882778-7887777 Trifolium pratense
Tp57577_TGAC_v2_gene6757 5.0kb downstream 5.0kb downstream 9189 true Tp57577_TGAC_v2_LG3: 7873589-7882777 Trifolium pratense
Tp57577_TGAC_v2_gene6757 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 7873589-7878588 Trifolium pratense
Tp57577_TGAC_v2_gene6757 10.0kb upstream 10.0kb upstream 14189 true Tp57577_TGAC_v2_LG3: 7878589-7892777 Trifolium pratense
Tp57577_TGAC_v2_gene6757 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 7882778-7892777 Trifolium pratense
Tp57577_TGAC_v2_gene6757 10.0kb downstream 10.0kb downstream 14189 true Tp57577_TGAC_v2_LG3: 7868589-7882777 Trifolium pratense
Tp57577_TGAC_v2_gene6757 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 7868589-7878588 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028487 5273 Angiosperm View MSA
122315509 5265 Fabidae View MSA
124042389 5270 Rosid View MSA
123744876 5271 Pentapetalae View MSA
122787544 5272 Eudicot View MSA
121349568 5274 Embryophyte View MSA
123426795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain