Gene : Tp57577_TGAC_v2_gene9556 T. pratense v2
Defline:  (1 of 2) 2.5.1.46 - Deoxyhypusine synthase / Spermidine dehydrogenase Genomic Order:  1229
Name:  ? Tp57577_TGAC_v2_gene9556 Secondary Identifier:  ? PAC:35987792
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5905 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9556 0.5kb upstream 0.5kb upstream 5879 true Tp57577_TGAC_v2_LG3: 9565874-9571752 Trifolium pratense
Tp57577_TGAC_v2_gene9556 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 9571253-9571752 Trifolium pratense
Tp57577_TGAC_v2_gene9556 0.5kb downstream 0.5kb downstream 5879 true Tp57577_TGAC_v2_LG3: 9565374-9571252 Trifolium pratense
Tp57577_TGAC_v2_gene9556 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 9565374-9565873 Trifolium pratense
Tp57577_TGAC_v2_gene9556 1.0kb upstream 1.0kb upstream 6379 true Tp57577_TGAC_v2_LG3: 9565874-9572252 Trifolium pratense
Tp57577_TGAC_v2_gene9556 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 9571253-9572252 Trifolium pratense
Tp57577_TGAC_v2_gene9556 1.0kb downstream 1.0kb downstream 6379 true Tp57577_TGAC_v2_LG3: 9564874-9571252 Trifolium pratense
Tp57577_TGAC_v2_gene9556 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 9564874-9565873 Trifolium pratense
Tp57577_TGAC_v2_gene9556 2.0kb upstream 2.0kb upstream 7379 true Tp57577_TGAC_v2_LG3: 9565874-9573252 Trifolium pratense
Tp57577_TGAC_v2_gene9556 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 9571253-9573252 Trifolium pratense
Tp57577_TGAC_v2_gene9556 2.0kb downstream 2.0kb downstream 7379 true Tp57577_TGAC_v2_LG3: 9563874-9571252 Trifolium pratense
Tp57577_TGAC_v2_gene9556 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 9563874-9565873 Trifolium pratense
Tp57577_TGAC_v2_gene9556 5.0kb upstream 5.0kb upstream 10379 true Tp57577_TGAC_v2_LG3: 9565874-9576252 Trifolium pratense
Tp57577_TGAC_v2_gene9556 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 9571253-9576252 Trifolium pratense
Tp57577_TGAC_v2_gene9556 5.0kb downstream 5.0kb downstream 10379 true Tp57577_TGAC_v2_LG3: 9560874-9571252 Trifolium pratense
Tp57577_TGAC_v2_gene9556 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 9560874-9565873 Trifolium pratense
Tp57577_TGAC_v2_gene9556 10.0kb upstream 10.0kb upstream 15379 true Tp57577_TGAC_v2_LG3: 9565874-9581252 Trifolium pratense
Tp57577_TGAC_v2_gene9556 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 9571253-9581252 Trifolium pratense
Tp57577_TGAC_v2_gene9556 10.0kb downstream 10.0kb downstream 15379 true Tp57577_TGAC_v2_LG3: 9555874-9571252 Trifolium pratense
Tp57577_TGAC_v2_gene9556 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 9555874-9565873 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300720 5265 Fabidae View MSA
124061456 5270 Rosid View MSA
123736781 5271 Pentapetalae View MSA
122791984 5272 Eudicot View MSA
122048082 5273 Angiosperm View MSA
121345605 5274 Embryophyte View MSA
123427897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain