Gene : Tp57577_TGAC_v2_gene9587 T. pratense v2
Defline:  (1 of 1) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Genomic Order:  1220
Name:  ? Tp57577_TGAC_v2_gene9587 Secondary Identifier:  ? PAC:35990059
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5173 Trifolium pratense pathologic  
Tpratense PWY-5464 Trifolium pratense pathologic  
Tpratense PYRUVDEHYD-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9587 0.5kb upstream 0.5kb upstream 3539 true Tp57577_TGAC_v2_LG3: 9518943-9522481 Trifolium pratense
Tp57577_TGAC_v2_gene9587 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 9521982-9522481 Trifolium pratense
Tp57577_TGAC_v2_gene9587 0.5kb downstream 0.5kb downstream 3539 true Tp57577_TGAC_v2_LG3: 9518443-9521981 Trifolium pratense
Tp57577_TGAC_v2_gene9587 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 9518443-9518942 Trifolium pratense
Tp57577_TGAC_v2_gene9587 1.0kb upstream 1.0kb upstream 4039 true Tp57577_TGAC_v2_LG3: 9518943-9522981 Trifolium pratense
Tp57577_TGAC_v2_gene9587 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 9521982-9522981 Trifolium pratense
Tp57577_TGAC_v2_gene9587 1.0kb downstream 1.0kb downstream 4039 true Tp57577_TGAC_v2_LG3: 9517943-9521981 Trifolium pratense
Tp57577_TGAC_v2_gene9587 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 9517943-9518942 Trifolium pratense
Tp57577_TGAC_v2_gene9587 2.0kb upstream 2.0kb upstream 5039 true Tp57577_TGAC_v2_LG3: 9518943-9523981 Trifolium pratense
Tp57577_TGAC_v2_gene9587 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 9521982-9523981 Trifolium pratense
Tp57577_TGAC_v2_gene9587 2.0kb downstream 2.0kb downstream 5039 true Tp57577_TGAC_v2_LG3: 9516943-9521981 Trifolium pratense
Tp57577_TGAC_v2_gene9587 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 9516943-9518942 Trifolium pratense
Tp57577_TGAC_v2_gene9587 5.0kb upstream 5.0kb upstream 8039 true Tp57577_TGAC_v2_LG3: 9518943-9526981 Trifolium pratense
Tp57577_TGAC_v2_gene9587 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 9521982-9526981 Trifolium pratense
Tp57577_TGAC_v2_gene9587 5.0kb downstream 5.0kb downstream 8039 true Tp57577_TGAC_v2_LG3: 9513943-9521981 Trifolium pratense
Tp57577_TGAC_v2_gene9587 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 9513943-9518942 Trifolium pratense
Tp57577_TGAC_v2_gene9587 10.0kb upstream 10.0kb upstream 13039 true Tp57577_TGAC_v2_LG3: 9518943-9531981 Trifolium pratense
Tp57577_TGAC_v2_gene9587 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 9521982-9531981 Trifolium pratense
Tp57577_TGAC_v2_gene9587 10.0kb downstream 10.0kb downstream 13039 true Tp57577_TGAC_v2_LG3: 9508943-9521981 Trifolium pratense
Tp57577_TGAC_v2_gene9587 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 9508943-9518942 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306477 5265 Fabidae View MSA
124062960 5270 Rosid View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain