Gene : Tp57577_TGAC_v2_gene6202 T. pratense v2
Defline:  (1 of 2) K15326 - tRNA-splicing endonuclease subunit Sen54 (TSEN54) Genomic Order:  775
Name:  ? Tp57577_TGAC_v2_gene6202 Secondary Identifier:  ? PAC:35989738
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6202 0.5kb upstream 0.5kb upstream 3369 true Tp57577_TGAC_v2_LG3: 5796311-5799679 Trifolium pratense
Tp57577_TGAC_v2_gene6202 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 5799180-5799679 Trifolium pratense
Tp57577_TGAC_v2_gene6202 0.5kb downstream 0.5kb downstream 3369 true Tp57577_TGAC_v2_LG3: 5795811-5799179 Trifolium pratense
Tp57577_TGAC_v2_gene6202 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 5795811-5796310 Trifolium pratense
Tp57577_TGAC_v2_gene6202 1.0kb upstream 1.0kb upstream 3869 true Tp57577_TGAC_v2_LG3: 5796311-5800179 Trifolium pratense
Tp57577_TGAC_v2_gene6202 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 5799180-5800179 Trifolium pratense
Tp57577_TGAC_v2_gene6202 1.0kb downstream 1.0kb downstream 3869 true Tp57577_TGAC_v2_LG3: 5795311-5799179 Trifolium pratense
Tp57577_TGAC_v2_gene6202 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 5795311-5796310 Trifolium pratense
Tp57577_TGAC_v2_gene6202 2.0kb upstream 2.0kb upstream 4869 true Tp57577_TGAC_v2_LG3: 5796311-5801179 Trifolium pratense
Tp57577_TGAC_v2_gene6202 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 5799180-5801179 Trifolium pratense
Tp57577_TGAC_v2_gene6202 2.0kb downstream 2.0kb downstream 4869 true Tp57577_TGAC_v2_LG3: 5794311-5799179 Trifolium pratense
Tp57577_TGAC_v2_gene6202 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 5794311-5796310 Trifolium pratense
Tp57577_TGAC_v2_gene6202 5.0kb upstream 5.0kb upstream 7869 true Tp57577_TGAC_v2_LG3: 5796311-5804179 Trifolium pratense
Tp57577_TGAC_v2_gene6202 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 5799180-5804179 Trifolium pratense
Tp57577_TGAC_v2_gene6202 5.0kb downstream 5.0kb downstream 7869 true Tp57577_TGAC_v2_LG3: 5791311-5799179 Trifolium pratense
Tp57577_TGAC_v2_gene6202 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 5791311-5796310 Trifolium pratense
Tp57577_TGAC_v2_gene6202 10.0kb upstream 10.0kb upstream 12869 true Tp57577_TGAC_v2_LG3: 5796311-5809179 Trifolium pratense
Tp57577_TGAC_v2_gene6202 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 5799180-5809179 Trifolium pratense
Tp57577_TGAC_v2_gene6202 10.0kb downstream 10.0kb downstream 12869 true Tp57577_TGAC_v2_LG3: 5786311-5799179 Trifolium pratense
Tp57577_TGAC_v2_gene6202 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 5786311-5796310 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301544 5265 Fabidae View MSA
124066915 5270 Rosid View MSA
123737661 5271 Pentapetalae View MSA
122790630 5272 Eudicot View MSA
122051332 5273 Angiosperm View MSA
121351548 5274 Embryophyte View MSA
123382220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain