Gene : Tp57577_TGAC_v2_gene6223 T. pratense v2
Defline:  (1 of 5) PTHR11452:SF14 - ALPHA-GALACTOSIDASE A Genomic Order:  731
Name:  ? Tp57577_TGAC_v2_gene6223 Secondary Identifier:  ? PAC:35989268
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY0-1301 Trifolium pratense pathologic  
Tpratense PWY-6527 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6223 0.5kb upstream 0.5kb upstream 4767 true Tp57577_TGAC_v2_LG3: 5484129-5488895 Trifolium pratense
Tp57577_TGAC_v2_gene6223 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 5484129-5484628 Trifolium pratense
Tp57577_TGAC_v2_gene6223 0.5kb downstream 0.5kb downstream 4767 true Tp57577_TGAC_v2_LG3: 5484629-5489395 Trifolium pratense
Tp57577_TGAC_v2_gene6223 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 5488896-5489395 Trifolium pratense
Tp57577_TGAC_v2_gene6223 1.0kb upstream 1.0kb upstream 5267 true Tp57577_TGAC_v2_LG3: 5483629-5488895 Trifolium pratense
Tp57577_TGAC_v2_gene6223 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 5483629-5484628 Trifolium pratense
Tp57577_TGAC_v2_gene6223 1.0kb downstream 1.0kb downstream 5267 true Tp57577_TGAC_v2_LG3: 5484629-5489895 Trifolium pratense
Tp57577_TGAC_v2_gene6223 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 5488896-5489895 Trifolium pratense
Tp57577_TGAC_v2_gene6223 2.0kb upstream 2.0kb upstream 6267 true Tp57577_TGAC_v2_LG3: 5482629-5488895 Trifolium pratense
Tp57577_TGAC_v2_gene6223 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 5482629-5484628 Trifolium pratense
Tp57577_TGAC_v2_gene6223 2.0kb downstream 2.0kb downstream 6267 true Tp57577_TGAC_v2_LG3: 5484629-5490895 Trifolium pratense
Tp57577_TGAC_v2_gene6223 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 5488896-5490895 Trifolium pratense
Tp57577_TGAC_v2_gene6223 5.0kb upstream 5.0kb upstream 9267 true Tp57577_TGAC_v2_LG3: 5479629-5488895 Trifolium pratense
Tp57577_TGAC_v2_gene6223 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 5479629-5484628 Trifolium pratense
Tp57577_TGAC_v2_gene6223 5.0kb downstream 5.0kb downstream 9267 true Tp57577_TGAC_v2_LG3: 5484629-5493895 Trifolium pratense
Tp57577_TGAC_v2_gene6223 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 5488896-5493895 Trifolium pratense
Tp57577_TGAC_v2_gene6223 10.0kb upstream 10.0kb upstream 14267 true Tp57577_TGAC_v2_LG3: 5474629-5488895 Trifolium pratense
Tp57577_TGAC_v2_gene6223 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 5474629-5484628 Trifolium pratense
Tp57577_TGAC_v2_gene6223 10.0kb downstream 10.0kb downstream 14267 true Tp57577_TGAC_v2_LG3: 5484629-5498895 Trifolium pratense
Tp57577_TGAC_v2_gene6223 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 5488896-5498895 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313960 5265 Fabidae View MSA
124064341 5270 Rosid View MSA
123740921 5271 Pentapetalae View MSA
122794912 5272 Eudicot View MSA
122043993 5273 Angiosperm View MSA
121347299 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain