Gene : Tp57577_TGAC_v2_gene3200 T. pratense v2
Defline:  (1 of 2) PTHR31707:SF13 - PECTINESTERASE/PECTINESTERASE INHIBITOR 21-RELATED Genomic Order:  2905
Name:  ? Tp57577_TGAC_v2_gene3200 Secondary Identifier:  ? PAC:35980335
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1081 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3200 0.5kb upstream 0.5kb upstream 2811 true Tp57577_TGAC_v2_LG1: 24431097-24433907 Trifolium pratense
Tp57577_TGAC_v2_gene3200 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 24431097-24431596 Trifolium pratense
Tp57577_TGAC_v2_gene3200 0.5kb downstream 0.5kb downstream 2811 true Tp57577_TGAC_v2_LG1: 24431597-24434407 Trifolium pratense
Tp57577_TGAC_v2_gene3200 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 24433908-24434407 Trifolium pratense
Tp57577_TGAC_v2_gene3200 1.0kb upstream 1.0kb upstream 3311 true Tp57577_TGAC_v2_LG1: 24430597-24433907 Trifolium pratense
Tp57577_TGAC_v2_gene3200 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 24430597-24431596 Trifolium pratense
Tp57577_TGAC_v2_gene3200 1.0kb downstream 1.0kb downstream 3311 true Tp57577_TGAC_v2_LG1: 24431597-24434907 Trifolium pratense
Tp57577_TGAC_v2_gene3200 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 24433908-24434907 Trifolium pratense
Tp57577_TGAC_v2_gene3200 2.0kb upstream 2.0kb upstream 4311 true Tp57577_TGAC_v2_LG1: 24429597-24433907 Trifolium pratense
Tp57577_TGAC_v2_gene3200 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 24429597-24431596 Trifolium pratense
Tp57577_TGAC_v2_gene3200 2.0kb downstream 2.0kb downstream 4311 true Tp57577_TGAC_v2_LG1: 24431597-24435907 Trifolium pratense
Tp57577_TGAC_v2_gene3200 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 24433908-24435907 Trifolium pratense
Tp57577_TGAC_v2_gene3200 5.0kb upstream 5.0kb upstream 7311 true Tp57577_TGAC_v2_LG1: 24426597-24433907 Trifolium pratense
Tp57577_TGAC_v2_gene3200 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 24426597-24431596 Trifolium pratense
Tp57577_TGAC_v2_gene3200 5.0kb downstream 5.0kb downstream 7311 true Tp57577_TGAC_v2_LG1: 24431597-24438907 Trifolium pratense
Tp57577_TGAC_v2_gene3200 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 24433908-24438907 Trifolium pratense
Tp57577_TGAC_v2_gene3200 10.0kb upstream 10.0kb upstream 12311 true Tp57577_TGAC_v2_LG1: 24421597-24433907 Trifolium pratense
Tp57577_TGAC_v2_gene3200 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 24421597-24431596 Trifolium pratense
Tp57577_TGAC_v2_gene3200 10.0kb downstream 10.0kb downstream 12311 true Tp57577_TGAC_v2_LG1: 24431597-24443907 Trifolium pratense
Tp57577_TGAC_v2_gene3200 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 24433908-24443907 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314375 5265 Fabidae View MSA
124071187 5270 Rosid View MSA
123743579 5271 Pentapetalae View MSA
122788004 5272 Eudicot View MSA
122050714 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain