Gene : Tp57577_TGAC_v2_gene3199 T. pratense v2
Defline:  (1 of 26) PF00643 - B-box zinc finger (zf-B_box) Genomic Order:  2901
Name:  ? Tp57577_TGAC_v2_gene3199 Secondary Identifier:  ? PAC:35979474
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3199 0.5kb upstream 0.5kb upstream 2350 true Tp57577_TGAC_v2_LG1: 24406297-24408646 Trifolium pratense
Tp57577_TGAC_v2_gene3199 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 24408147-24408646 Trifolium pratense
Tp57577_TGAC_v2_gene3199 0.5kb downstream 0.5kb downstream 2350 true Tp57577_TGAC_v2_LG1: 24405797-24408146 Trifolium pratense
Tp57577_TGAC_v2_gene3199 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 24405797-24406296 Trifolium pratense
Tp57577_TGAC_v2_gene3199 1.0kb upstream 1.0kb upstream 2850 true Tp57577_TGAC_v2_LG1: 24406297-24409146 Trifolium pratense
Tp57577_TGAC_v2_gene3199 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 24408147-24409146 Trifolium pratense
Tp57577_TGAC_v2_gene3199 1.0kb downstream 1.0kb downstream 2850 true Tp57577_TGAC_v2_LG1: 24405297-24408146 Trifolium pratense
Tp57577_TGAC_v2_gene3199 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 24405297-24406296 Trifolium pratense
Tp57577_TGAC_v2_gene3199 2.0kb upstream 2.0kb upstream 3850 true Tp57577_TGAC_v2_LG1: 24406297-24410146 Trifolium pratense
Tp57577_TGAC_v2_gene3199 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 24408147-24410146 Trifolium pratense
Tp57577_TGAC_v2_gene3199 2.0kb downstream 2.0kb downstream 3850 true Tp57577_TGAC_v2_LG1: 24404297-24408146 Trifolium pratense
Tp57577_TGAC_v2_gene3199 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 24404297-24406296 Trifolium pratense
Tp57577_TGAC_v2_gene3199 5.0kb upstream 5.0kb upstream 6850 true Tp57577_TGAC_v2_LG1: 24406297-24413146 Trifolium pratense
Tp57577_TGAC_v2_gene3199 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 24408147-24413146 Trifolium pratense
Tp57577_TGAC_v2_gene3199 5.0kb downstream 5.0kb downstream 6850 true Tp57577_TGAC_v2_LG1: 24401297-24408146 Trifolium pratense
Tp57577_TGAC_v2_gene3199 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 24401297-24406296 Trifolium pratense
Tp57577_TGAC_v2_gene3199 10.0kb upstream 10.0kb upstream 11850 true Tp57577_TGAC_v2_LG1: 24406297-24418146 Trifolium pratense
Tp57577_TGAC_v2_gene3199 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 24408147-24418146 Trifolium pratense
Tp57577_TGAC_v2_gene3199 10.0kb downstream 10.0kb downstream 11850 true Tp57577_TGAC_v2_LG1: 24396297-24408146 Trifolium pratense
Tp57577_TGAC_v2_gene3199 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 24396297-24406296 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305493 5265 Fabidae View MSA
124065610 5270 Rosid View MSA
123744557 5271 Pentapetalae View MSA
122787512 5272 Eudicot View MSA
122049628 5273 Angiosperm View MSA
121350336 5274 Embryophyte View MSA
123427282 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain