Gene : Tp57577_TGAC_v2_gene33321 T. pratense v2
Defline:  (1 of 1) PTHR23076:SF40 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 11, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  1951
Name:  ? Tp57577_TGAC_v2_gene33321 Secondary Identifier:  ? PAC:35980337
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene33321 0.5kb upstream 0.5kb upstream 11271 true Tp57577_TGAC_v2_LG1: 16397488-16408758 Trifolium pratense
Tp57577_TGAC_v2_gene33321 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 16397488-16397987 Trifolium pratense
Tp57577_TGAC_v2_gene33321 0.5kb downstream 0.5kb downstream 11271 true Tp57577_TGAC_v2_LG1: 16397988-16409258 Trifolium pratense
Tp57577_TGAC_v2_gene33321 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 16408759-16409258 Trifolium pratense
Tp57577_TGAC_v2_gene33321 1.0kb upstream 1.0kb upstream 11771 true Tp57577_TGAC_v2_LG1: 16396988-16408758 Trifolium pratense
Tp57577_TGAC_v2_gene33321 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 16396988-16397987 Trifolium pratense
Tp57577_TGAC_v2_gene33321 1.0kb downstream 1.0kb downstream 11771 true Tp57577_TGAC_v2_LG1: 16397988-16409758 Trifolium pratense
Tp57577_TGAC_v2_gene33321 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 16408759-16409758 Trifolium pratense
Tp57577_TGAC_v2_gene33321 2.0kb upstream 2.0kb upstream 12771 true Tp57577_TGAC_v2_LG1: 16395988-16408758 Trifolium pratense
Tp57577_TGAC_v2_gene33321 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 16395988-16397987 Trifolium pratense
Tp57577_TGAC_v2_gene33321 2.0kb downstream 2.0kb downstream 12771 true Tp57577_TGAC_v2_LG1: 16397988-16410758 Trifolium pratense
Tp57577_TGAC_v2_gene33321 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 16408759-16410758 Trifolium pratense
Tp57577_TGAC_v2_gene33321 5.0kb upstream 5.0kb upstream 15771 true Tp57577_TGAC_v2_LG1: 16392988-16408758 Trifolium pratense
Tp57577_TGAC_v2_gene33321 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 16392988-16397987 Trifolium pratense
Tp57577_TGAC_v2_gene33321 5.0kb downstream 5.0kb downstream 15771 true Tp57577_TGAC_v2_LG1: 16397988-16413758 Trifolium pratense
Tp57577_TGAC_v2_gene33321 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 16408759-16413758 Trifolium pratense
Tp57577_TGAC_v2_gene33321 10.0kb upstream 10.0kb upstream 20771 true Tp57577_TGAC_v2_LG1: 16387988-16408758 Trifolium pratense
Tp57577_TGAC_v2_gene33321 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 16387988-16397987 Trifolium pratense
Tp57577_TGAC_v2_gene33321 10.0kb downstream 10.0kb downstream 20771 true Tp57577_TGAC_v2_LG1: 16397988-16418758 Trifolium pratense
Tp57577_TGAC_v2_gene33321 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 16408759-16418758 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299271 5265 Fabidae View MSA
124073797 5270 Rosid View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain