Gene : Tp57577_TGAC_v2_gene16998 T. pratense v2
Defline:  (1 of 4) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene16998 Secondary Identifier:  ? PAC:35954125
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16998 0.5kb upstream 0.5kb upstream 1553 true Tp57577_TGAC_v2_scaf_2668: 2043-3595 Trifolium pratense
Tp57577_TGAC_v2_gene16998 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_2668: 3096-3595 Trifolium pratense
Tp57577_TGAC_v2_gene16998 0.5kb downstream 0.5kb downstream 1553 true Tp57577_TGAC_v2_scaf_2668: 1543-3095 Trifolium pratense
Tp57577_TGAC_v2_gene16998 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_2668: 1543-2042 Trifolium pratense
Tp57577_TGAC_v2_gene16998 1.0kb upstream 1.0kb upstream 2053 true Tp57577_TGAC_v2_scaf_2668: 2043-4095 Trifolium pratense
Tp57577_TGAC_v2_gene16998 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_2668: 3096-4095 Trifolium pratense
Tp57577_TGAC_v2_gene16998 1.0kb downstream 1.0kb downstream 2053 true Tp57577_TGAC_v2_scaf_2668: 1043-3095 Trifolium pratense
Tp57577_TGAC_v2_gene16998 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_2668: 1043-2042 Trifolium pratense
Tp57577_TGAC_v2_gene16998 2.0kb upstream 2.0kb upstream 3031 true Tp57577_TGAC_v2_scaf_2668: 2043-5073 Trifolium pratense
Tp57577_TGAC_v2_gene16998 2.0kb upstream 2.0kb upstream 1978 false Tp57577_TGAC_v2_scaf_2668: 3096-5073 Trifolium pratense
Tp57577_TGAC_v2_gene16998 2.0kb downstream 2.0kb downstream 3053 true Tp57577_TGAC_v2_scaf_2668: 43-3095 Trifolium pratense
Tp57577_TGAC_v2_gene16998 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_2668: 43-2042 Trifolium pratense
Tp57577_TGAC_v2_gene16998 5.0kb upstream 5.0kb upstream 3031 true Tp57577_TGAC_v2_scaf_2668: 2043-5073 Trifolium pratense
Tp57577_TGAC_v2_gene16998 5.0kb upstream 5.0kb upstream 1978 false Tp57577_TGAC_v2_scaf_2668: 3096-5073 Trifolium pratense
Tp57577_TGAC_v2_gene16998 5.0kb downstream 5.0kb downstream 3095 true Tp57577_TGAC_v2_scaf_2668: 1-3095 Trifolium pratense
Tp57577_TGAC_v2_gene16998 5.0kb downstream 5.0kb downstream 2042 false Tp57577_TGAC_v2_scaf_2668: 1-2042 Trifolium pratense
Tp57577_TGAC_v2_gene16998 10.0kb upstream 10.0kb upstream 3031 true Tp57577_TGAC_v2_scaf_2668: 2043-5073 Trifolium pratense
Tp57577_TGAC_v2_gene16998 10.0kb upstream 10.0kb upstream 1978 false Tp57577_TGAC_v2_scaf_2668: 3096-5073 Trifolium pratense
Tp57577_TGAC_v2_gene16998 10.0kb downstream 10.0kb downstream 3095 true Tp57577_TGAC_v2_scaf_2668: 1-3095 Trifolium pratense
Tp57577_TGAC_v2_gene16998 10.0kb downstream 10.0kb downstream 2042 false Tp57577_TGAC_v2_scaf_2668: 1-2042 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300137 5265 Fabidae View MSA
124065171 5270 Rosid View MSA
123741196 5271 Pentapetalae View MSA
122795014 5272 Eudicot View MSA
122048300 5273 Angiosperm View MSA
121310921 5274 Embryophyte View MSA
123348293 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain