Gene : Tp57577_TGAC_v2_gene30480 T. pratense v2
Defline:  (1 of 9) PF05142 - Domain of unknown function (DUF702) (DUF702) Genomic Order:  3195
Name:  ? Tp57577_TGAC_v2_gene30480 Secondary Identifier:  ? PAC:35979888
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30480 0.5kb upstream 0.5kb upstream 3259 true Tp57577_TGAC_v2_LG1: 27555655-27558913 Trifolium pratense
Tp57577_TGAC_v2_gene30480 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 27558414-27558913 Trifolium pratense
Tp57577_TGAC_v2_gene30480 0.5kb downstream 0.5kb downstream 3259 true Tp57577_TGAC_v2_LG1: 27555155-27558413 Trifolium pratense
Tp57577_TGAC_v2_gene30480 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 27555155-27555654 Trifolium pratense
Tp57577_TGAC_v2_gene30480 1.0kb upstream 1.0kb upstream 3759 true Tp57577_TGAC_v2_LG1: 27555655-27559413 Trifolium pratense
Tp57577_TGAC_v2_gene30480 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 27558414-27559413 Trifolium pratense
Tp57577_TGAC_v2_gene30480 1.0kb downstream 1.0kb downstream 3759 true Tp57577_TGAC_v2_LG1: 27554655-27558413 Trifolium pratense
Tp57577_TGAC_v2_gene30480 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 27554655-27555654 Trifolium pratense
Tp57577_TGAC_v2_gene30480 2.0kb upstream 2.0kb upstream 4759 true Tp57577_TGAC_v2_LG1: 27555655-27560413 Trifolium pratense
Tp57577_TGAC_v2_gene30480 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 27558414-27560413 Trifolium pratense
Tp57577_TGAC_v2_gene30480 2.0kb downstream 2.0kb downstream 4759 true Tp57577_TGAC_v2_LG1: 27553655-27558413 Trifolium pratense
Tp57577_TGAC_v2_gene30480 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 27553655-27555654 Trifolium pratense
Tp57577_TGAC_v2_gene30480 5.0kb upstream 5.0kb upstream 7759 true Tp57577_TGAC_v2_LG1: 27555655-27563413 Trifolium pratense
Tp57577_TGAC_v2_gene30480 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 27558414-27563413 Trifolium pratense
Tp57577_TGAC_v2_gene30480 5.0kb downstream 5.0kb downstream 7759 true Tp57577_TGAC_v2_LG1: 27550655-27558413 Trifolium pratense
Tp57577_TGAC_v2_gene30480 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 27550655-27555654 Trifolium pratense
Tp57577_TGAC_v2_gene30480 10.0kb upstream 10.0kb upstream 12759 true Tp57577_TGAC_v2_LG1: 27555655-27568413 Trifolium pratense
Tp57577_TGAC_v2_gene30480 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 27558414-27568413 Trifolium pratense
Tp57577_TGAC_v2_gene30480 10.0kb downstream 10.0kb downstream 12759 true Tp57577_TGAC_v2_LG1: 27545655-27558413 Trifolium pratense
Tp57577_TGAC_v2_gene30480 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 27545655-27555654 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311676 5265 Fabidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain