Gene : Tp57577_TGAC_v2_gene3039 T. pratense v2
Defline:  (1 of 2) PTHR31734:SF15 - AUXIN-RESPONSIVE PROTEIN IAA20-RELATED Genomic Order:  2568
Name:  ? Tp57577_TGAC_v2_gene3039 Secondary Identifier:  ? PAC:35979538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3039 0.5kb upstream 0.5kb upstream 1831 true Tp57577_TGAC_v2_LG1: 21666259-21668089 Trifolium pratense
Tp57577_TGAC_v2_gene3039 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 21667590-21668089 Trifolium pratense
Tp57577_TGAC_v2_gene3039 0.5kb downstream 0.5kb downstream 1831 true Tp57577_TGAC_v2_LG1: 21665759-21667589 Trifolium pratense
Tp57577_TGAC_v2_gene3039 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 21665759-21666258 Trifolium pratense
Tp57577_TGAC_v2_gene3039 1.0kb upstream 1.0kb upstream 2331 true Tp57577_TGAC_v2_LG1: 21666259-21668589 Trifolium pratense
Tp57577_TGAC_v2_gene3039 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 21667590-21668589 Trifolium pratense
Tp57577_TGAC_v2_gene3039 1.0kb downstream 1.0kb downstream 2331 true Tp57577_TGAC_v2_LG1: 21665259-21667589 Trifolium pratense
Tp57577_TGAC_v2_gene3039 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 21665259-21666258 Trifolium pratense
Tp57577_TGAC_v2_gene3039 2.0kb upstream 2.0kb upstream 3331 true Tp57577_TGAC_v2_LG1: 21666259-21669589 Trifolium pratense
Tp57577_TGAC_v2_gene3039 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 21667590-21669589 Trifolium pratense
Tp57577_TGAC_v2_gene3039 2.0kb downstream 2.0kb downstream 3331 true Tp57577_TGAC_v2_LG1: 21664259-21667589 Trifolium pratense
Tp57577_TGAC_v2_gene3039 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 21664259-21666258 Trifolium pratense
Tp57577_TGAC_v2_gene3039 5.0kb upstream 5.0kb upstream 6331 true Tp57577_TGAC_v2_LG1: 21666259-21672589 Trifolium pratense
Tp57577_TGAC_v2_gene3039 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 21667590-21672589 Trifolium pratense
Tp57577_TGAC_v2_gene3039 5.0kb downstream 5.0kb downstream 6331 true Tp57577_TGAC_v2_LG1: 21661259-21667589 Trifolium pratense
Tp57577_TGAC_v2_gene3039 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 21661259-21666258 Trifolium pratense
Tp57577_TGAC_v2_gene3039 10.0kb upstream 10.0kb upstream 11331 true Tp57577_TGAC_v2_LG1: 21666259-21677589 Trifolium pratense
Tp57577_TGAC_v2_gene3039 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 21667590-21677589 Trifolium pratense
Tp57577_TGAC_v2_gene3039 10.0kb downstream 10.0kb downstream 11331 true Tp57577_TGAC_v2_LG1: 21656259-21667589 Trifolium pratense
Tp57577_TGAC_v2_gene3039 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 21656259-21666258 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297026 5265 Fabidae View MSA
124071177 5270 Rosid View MSA
123752177 5271 Pentapetalae View MSA
122794866 5272 Eudicot View MSA
122051273 5273 Angiosperm View MSA
121350717 5274 Embryophyte View MSA
123381856 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain