Gene : Tp57577_TGAC_v2_gene30478 T. pratense v2
Defline:  (1 of 162) PF00847 - AP2 domain (AP2) Genomic Order:  3191
Name:  ? Tp57577_TGAC_v2_gene30478 Secondary Identifier:  ? PAC:35981316
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30478 0.5kb upstream 0.5kb upstream 2071 true Tp57577_TGAC_v2_LG1: 27519314-27521384 Trifolium pratense
Tp57577_TGAC_v2_gene30478 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 27519314-27519813 Trifolium pratense
Tp57577_TGAC_v2_gene30478 0.5kb downstream 0.5kb downstream 2071 true Tp57577_TGAC_v2_LG1: 27519814-27521884 Trifolium pratense
Tp57577_TGAC_v2_gene30478 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 27521385-27521884 Trifolium pratense
Tp57577_TGAC_v2_gene30478 1.0kb upstream 1.0kb upstream 2571 true Tp57577_TGAC_v2_LG1: 27518814-27521384 Trifolium pratense
Tp57577_TGAC_v2_gene30478 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 27518814-27519813 Trifolium pratense
Tp57577_TGAC_v2_gene30478 1.0kb downstream 1.0kb downstream 2571 true Tp57577_TGAC_v2_LG1: 27519814-27522384 Trifolium pratense
Tp57577_TGAC_v2_gene30478 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 27521385-27522384 Trifolium pratense
Tp57577_TGAC_v2_gene30478 2.0kb upstream 2.0kb upstream 3571 true Tp57577_TGAC_v2_LG1: 27517814-27521384 Trifolium pratense
Tp57577_TGAC_v2_gene30478 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 27517814-27519813 Trifolium pratense
Tp57577_TGAC_v2_gene30478 2.0kb downstream 2.0kb downstream 3571 true Tp57577_TGAC_v2_LG1: 27519814-27523384 Trifolium pratense
Tp57577_TGAC_v2_gene30478 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 27521385-27523384 Trifolium pratense
Tp57577_TGAC_v2_gene30478 5.0kb upstream 5.0kb upstream 6571 true Tp57577_TGAC_v2_LG1: 27514814-27521384 Trifolium pratense
Tp57577_TGAC_v2_gene30478 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 27514814-27519813 Trifolium pratense
Tp57577_TGAC_v2_gene30478 5.0kb downstream 5.0kb downstream 6571 true Tp57577_TGAC_v2_LG1: 27519814-27526384 Trifolium pratense
Tp57577_TGAC_v2_gene30478 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 27521385-27526384 Trifolium pratense
Tp57577_TGAC_v2_gene30478 10.0kb upstream 10.0kb upstream 11571 true Tp57577_TGAC_v2_LG1: 27509814-27521384 Trifolium pratense
Tp57577_TGAC_v2_gene30478 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 27509814-27519813 Trifolium pratense
Tp57577_TGAC_v2_gene30478 10.0kb downstream 10.0kb downstream 11571 true Tp57577_TGAC_v2_LG1: 27519814-27531384 Trifolium pratense
Tp57577_TGAC_v2_gene30478 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 27521385-27531384 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312723 5265 Fabidae View MSA
124072690 5270 Rosid View MSA
123750816 5271 Pentapetalae View MSA
122794401 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain