Gene : Tp57577_TGAC_v2_gene3083 T. pratense v2
Defline:  (1 of 1) PTHR36027:SF1 - ASYNAPTIC 3 Genomic Order:  2570
Name:  ? Tp57577_TGAC_v2_gene3083 Secondary Identifier:  ? PAC:35978138
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3083 0.5kb upstream 0.5kb upstream 6842 true Tp57577_TGAC_v2_LG1: 21684730-21691571 Trifolium pratense
Tp57577_TGAC_v2_gene3083 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 21684730-21685229 Trifolium pratense
Tp57577_TGAC_v2_gene3083 0.5kb downstream 0.5kb downstream 6842 true Tp57577_TGAC_v2_LG1: 21685230-21692071 Trifolium pratense
Tp57577_TGAC_v2_gene3083 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 21691572-21692071 Trifolium pratense
Tp57577_TGAC_v2_gene3083 1.0kb upstream 1.0kb upstream 7342 true Tp57577_TGAC_v2_LG1: 21684230-21691571 Trifolium pratense
Tp57577_TGAC_v2_gene3083 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 21684230-21685229 Trifolium pratense
Tp57577_TGAC_v2_gene3083 1.0kb downstream 1.0kb downstream 7342 true Tp57577_TGAC_v2_LG1: 21685230-21692571 Trifolium pratense
Tp57577_TGAC_v2_gene3083 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 21691572-21692571 Trifolium pratense
Tp57577_TGAC_v2_gene3083 2.0kb upstream 2.0kb upstream 8342 true Tp57577_TGAC_v2_LG1: 21683230-21691571 Trifolium pratense
Tp57577_TGAC_v2_gene3083 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 21683230-21685229 Trifolium pratense
Tp57577_TGAC_v2_gene3083 2.0kb downstream 2.0kb downstream 8342 true Tp57577_TGAC_v2_LG1: 21685230-21693571 Trifolium pratense
Tp57577_TGAC_v2_gene3083 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 21691572-21693571 Trifolium pratense
Tp57577_TGAC_v2_gene3083 5.0kb upstream 5.0kb upstream 11342 true Tp57577_TGAC_v2_LG1: 21680230-21691571 Trifolium pratense
Tp57577_TGAC_v2_gene3083 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 21680230-21685229 Trifolium pratense
Tp57577_TGAC_v2_gene3083 5.0kb downstream 5.0kb downstream 11342 true Tp57577_TGAC_v2_LG1: 21685230-21696571 Trifolium pratense
Tp57577_TGAC_v2_gene3083 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 21691572-21696571 Trifolium pratense
Tp57577_TGAC_v2_gene3083 10.0kb upstream 10.0kb upstream 16342 true Tp57577_TGAC_v2_LG1: 21675230-21691571 Trifolium pratense
Tp57577_TGAC_v2_gene3083 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 21675230-21685229 Trifolium pratense
Tp57577_TGAC_v2_gene3083 10.0kb downstream 10.0kb downstream 16342 true Tp57577_TGAC_v2_LG1: 21685230-21701571 Trifolium pratense
Tp57577_TGAC_v2_gene3083 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 21691572-21701571 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026354 5273 Angiosperm View MSA
122301554 5265 Fabidae View MSA
124064742 5270 Rosid View MSA
123736422 5271 Pentapetalae View MSA
122789139 5272 Eudicot View MSA
121296292 5274 Embryophyte View MSA
123334482 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain