Gene : Tp57577_TGAC_v2_gene3166 T. pratense v2
Defline:  (1 of 1) PTHR12606//PTHR12606:SF23 - SENTRIN/SUMO-SPECIFIC PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  2918
Name:  ? Tp57577_TGAC_v2_gene3166 Secondary Identifier:  ? PAC:35979344
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3166 0.5kb upstream 0.5kb upstream 7030 true Tp57577_TGAC_v2_LG1: 24530389-24537418 Trifolium pratense
Tp57577_TGAC_v2_gene3166 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 24536919-24537418 Trifolium pratense
Tp57577_TGAC_v2_gene3166 0.5kb downstream 0.5kb downstream 7030 true Tp57577_TGAC_v2_LG1: 24529889-24536918 Trifolium pratense
Tp57577_TGAC_v2_gene3166 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 24529889-24530388 Trifolium pratense
Tp57577_TGAC_v2_gene3166 1.0kb upstream 1.0kb upstream 7530 true Tp57577_TGAC_v2_LG1: 24530389-24537918 Trifolium pratense
Tp57577_TGAC_v2_gene3166 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 24536919-24537918 Trifolium pratense
Tp57577_TGAC_v2_gene3166 1.0kb downstream 1.0kb downstream 7530 true Tp57577_TGAC_v2_LG1: 24529389-24536918 Trifolium pratense
Tp57577_TGAC_v2_gene3166 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 24529389-24530388 Trifolium pratense
Tp57577_TGAC_v2_gene3166 2.0kb upstream 2.0kb upstream 8530 true Tp57577_TGAC_v2_LG1: 24530389-24538918 Trifolium pratense
Tp57577_TGAC_v2_gene3166 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 24536919-24538918 Trifolium pratense
Tp57577_TGAC_v2_gene3166 2.0kb downstream 2.0kb downstream 8530 true Tp57577_TGAC_v2_LG1: 24528389-24536918 Trifolium pratense
Tp57577_TGAC_v2_gene3166 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 24528389-24530388 Trifolium pratense
Tp57577_TGAC_v2_gene3166 5.0kb upstream 5.0kb upstream 11530 true Tp57577_TGAC_v2_LG1: 24530389-24541918 Trifolium pratense
Tp57577_TGAC_v2_gene3166 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 24536919-24541918 Trifolium pratense
Tp57577_TGAC_v2_gene3166 5.0kb downstream 5.0kb downstream 11530 true Tp57577_TGAC_v2_LG1: 24525389-24536918 Trifolium pratense
Tp57577_TGAC_v2_gene3166 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 24525389-24530388 Trifolium pratense
Tp57577_TGAC_v2_gene3166 10.0kb upstream 10.0kb upstream 16530 true Tp57577_TGAC_v2_LG1: 24530389-24546918 Trifolium pratense
Tp57577_TGAC_v2_gene3166 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 24536919-24546918 Trifolium pratense
Tp57577_TGAC_v2_gene3166 10.0kb downstream 10.0kb downstream 16530 true Tp57577_TGAC_v2_LG1: 24520389-24536918 Trifolium pratense
Tp57577_TGAC_v2_gene3166 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 24520389-24530388 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311892 5265 Fabidae View MSA
124062657 5270 Rosid View MSA
123737823 5271 Pentapetalae View MSA
122797734 5272 Eudicot View MSA
122046617 5273 Angiosperm View MSA
121348677 5274 Embryophyte View MSA
123380965 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain