Gene : Tp57577_TGAC_v2_gene40078 T. pratense v2
Defline:  (1 of 2) PTHR23024//PTHR23024:SF189 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene40078 Secondary Identifier:  ? PAC:35959721
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6303 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene40078 0.5kb upstream 0.5kb upstream 2408 true Tp57577_TGAC_v2_scaf_2789: 2305-4712 Trifolium pratense
Tp57577_TGAC_v2_gene40078 0.5kb upstream 0.5kb upstream 117 false Tp57577_TGAC_v2_scaf_2789: 4596-4712 Trifolium pratense
Tp57577_TGAC_v2_gene40078 0.5kb downstream 0.5kb downstream 2791 true Tp57577_TGAC_v2_scaf_2789: 1805-4595 Trifolium pratense
Tp57577_TGAC_v2_gene40078 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_2789: 1805-2304 Trifolium pratense
Tp57577_TGAC_v2_gene40078 1.0kb upstream 1.0kb upstream 2408 true Tp57577_TGAC_v2_scaf_2789: 2305-4712 Trifolium pratense
Tp57577_TGAC_v2_gene40078 1.0kb upstream 1.0kb upstream 117 false Tp57577_TGAC_v2_scaf_2789: 4596-4712 Trifolium pratense
Tp57577_TGAC_v2_gene40078 1.0kb downstream 1.0kb downstream 3291 true Tp57577_TGAC_v2_scaf_2789: 1305-4595 Trifolium pratense
Tp57577_TGAC_v2_gene40078 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_2789: 1305-2304 Trifolium pratense
Tp57577_TGAC_v2_gene40078 2.0kb upstream 2.0kb upstream 2408 true Tp57577_TGAC_v2_scaf_2789: 2305-4712 Trifolium pratense
Tp57577_TGAC_v2_gene40078 2.0kb upstream 2.0kb upstream 117 false Tp57577_TGAC_v2_scaf_2789: 4596-4712 Trifolium pratense
Tp57577_TGAC_v2_gene40078 2.0kb downstream 2.0kb downstream 4291 true Tp57577_TGAC_v2_scaf_2789: 305-4595 Trifolium pratense
Tp57577_TGAC_v2_gene40078 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_2789: 305-2304 Trifolium pratense
Tp57577_TGAC_v2_gene40078 5.0kb upstream 5.0kb upstream 2408 true Tp57577_TGAC_v2_scaf_2789: 2305-4712 Trifolium pratense
Tp57577_TGAC_v2_gene40078 5.0kb upstream 5.0kb upstream 117 false Tp57577_TGAC_v2_scaf_2789: 4596-4712 Trifolium pratense
Tp57577_TGAC_v2_gene40078 5.0kb downstream 5.0kb downstream 4595 true Tp57577_TGAC_v2_scaf_2789: 1-4595 Trifolium pratense
Tp57577_TGAC_v2_gene40078 5.0kb downstream 5.0kb downstream 2304 false Tp57577_TGAC_v2_scaf_2789: 1-2304 Trifolium pratense
Tp57577_TGAC_v2_gene40078 10.0kb upstream 10.0kb upstream 2408 true Tp57577_TGAC_v2_scaf_2789: 2305-4712 Trifolium pratense
Tp57577_TGAC_v2_gene40078 10.0kb upstream 10.0kb upstream 117 false Tp57577_TGAC_v2_scaf_2789: 4596-4712 Trifolium pratense
Tp57577_TGAC_v2_gene40078 10.0kb downstream 10.0kb downstream 4595 true Tp57577_TGAC_v2_scaf_2789: 1-4595 Trifolium pratense
Tp57577_TGAC_v2_gene40078 10.0kb downstream 10.0kb downstream 2304 false Tp57577_TGAC_v2_scaf_2789: 1-2304 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299309 5265 Fabidae View MSA
124070947 5270 Rosid View MSA
123751656 5271 Pentapetalae View MSA
122793188 5272 Eudicot View MSA
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain