Gene : Tp57577_TGAC_v2_gene36866 T. pratense v2
Defline:  (1 of 1) K15446 - tRNA:m4X modification enzyme [EC:2.1.1.225] (TRM13, CCDC76) Genomic Order:  2417
Name:  ? Tp57577_TGAC_v2_gene36866 Secondary Identifier:  ? PAC:35978643
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6829 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene36866 0.5kb upstream 0.5kb upstream 4701 true Tp57577_TGAC_v2_LG1: 20501070-20505770 Trifolium pratense
Tp57577_TGAC_v2_gene36866 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 20505271-20505770 Trifolium pratense
Tp57577_TGAC_v2_gene36866 0.5kb downstream 0.5kb downstream 4701 true Tp57577_TGAC_v2_LG1: 20500570-20505270 Trifolium pratense
Tp57577_TGAC_v2_gene36866 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 20500570-20501069 Trifolium pratense
Tp57577_TGAC_v2_gene36866 1.0kb upstream 1.0kb upstream 5201 true Tp57577_TGAC_v2_LG1: 20501070-20506270 Trifolium pratense
Tp57577_TGAC_v2_gene36866 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 20505271-20506270 Trifolium pratense
Tp57577_TGAC_v2_gene36866 1.0kb downstream 1.0kb downstream 5201 true Tp57577_TGAC_v2_LG1: 20500070-20505270 Trifolium pratense
Tp57577_TGAC_v2_gene36866 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 20500070-20501069 Trifolium pratense
Tp57577_TGAC_v2_gene36866 2.0kb upstream 2.0kb upstream 6201 true Tp57577_TGAC_v2_LG1: 20501070-20507270 Trifolium pratense
Tp57577_TGAC_v2_gene36866 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 20505271-20507270 Trifolium pratense
Tp57577_TGAC_v2_gene36866 2.0kb downstream 2.0kb downstream 6201 true Tp57577_TGAC_v2_LG1: 20499070-20505270 Trifolium pratense
Tp57577_TGAC_v2_gene36866 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 20499070-20501069 Trifolium pratense
Tp57577_TGAC_v2_gene36866 5.0kb upstream 5.0kb upstream 9201 true Tp57577_TGAC_v2_LG1: 20501070-20510270 Trifolium pratense
Tp57577_TGAC_v2_gene36866 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 20505271-20510270 Trifolium pratense
Tp57577_TGAC_v2_gene36866 5.0kb downstream 5.0kb downstream 9201 true Tp57577_TGAC_v2_LG1: 20496070-20505270 Trifolium pratense
Tp57577_TGAC_v2_gene36866 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 20496070-20501069 Trifolium pratense
Tp57577_TGAC_v2_gene36866 10.0kb upstream 10.0kb upstream 14201 true Tp57577_TGAC_v2_LG1: 20501070-20515270 Trifolium pratense
Tp57577_TGAC_v2_gene36866 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 20505271-20515270 Trifolium pratense
Tp57577_TGAC_v2_gene36866 10.0kb downstream 10.0kb downstream 14201 true Tp57577_TGAC_v2_LG1: 20491070-20505270 Trifolium pratense
Tp57577_TGAC_v2_gene36866 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 20491070-20501069 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307487 5265 Fabidae View MSA
124062140 5270 Rosid View MSA
123739890 5271 Pentapetalae View MSA
122785784 5272 Eudicot View MSA
122046541 5273 Angiosperm View MSA
121347915 5274 Embryophyte View MSA
123424709 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain