Gene : Tp57577_TGAC_v2_gene16335 T. pratense v2
Defline:  (1 of 2) K02988 - small subunit ribosomal protein S5 (RP-S5, MRPS5, rpsE) Genomic Order:  15
Name:  ? Tp57577_TGAC_v2_gene16335 Secondary Identifier:  ? PAC:35966791
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16335 0.5kb upstream 0.5kb upstream 3365 true Tp57577_TGAC_v2_scaf_271: 123026-126390 Trifolium pratense
Tp57577_TGAC_v2_gene16335 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_271: 123026-123525 Trifolium pratense
Tp57577_TGAC_v2_gene16335 0.5kb downstream 0.5kb downstream 3365 true Tp57577_TGAC_v2_scaf_271: 123526-126890 Trifolium pratense
Tp57577_TGAC_v2_gene16335 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_271: 126391-126890 Trifolium pratense
Tp57577_TGAC_v2_gene16335 1.0kb upstream 1.0kb upstream 3865 true Tp57577_TGAC_v2_scaf_271: 122526-126390 Trifolium pratense
Tp57577_TGAC_v2_gene16335 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_271: 122526-123525 Trifolium pratense
Tp57577_TGAC_v2_gene16335 1.0kb downstream 1.0kb downstream 3865 true Tp57577_TGAC_v2_scaf_271: 123526-127390 Trifolium pratense
Tp57577_TGAC_v2_gene16335 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_271: 126391-127390 Trifolium pratense
Tp57577_TGAC_v2_gene16335 2.0kb upstream 2.0kb upstream 4865 true Tp57577_TGAC_v2_scaf_271: 121526-126390 Trifolium pratense
Tp57577_TGAC_v2_gene16335 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_271: 121526-123525 Trifolium pratense
Tp57577_TGAC_v2_gene16335 2.0kb downstream 2.0kb downstream 4865 true Tp57577_TGAC_v2_scaf_271: 123526-128390 Trifolium pratense
Tp57577_TGAC_v2_gene16335 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_271: 126391-128390 Trifolium pratense
Tp57577_TGAC_v2_gene16335 5.0kb upstream 5.0kb upstream 7865 true Tp57577_TGAC_v2_scaf_271: 118526-126390 Trifolium pratense
Tp57577_TGAC_v2_gene16335 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_271: 118526-123525 Trifolium pratense
Tp57577_TGAC_v2_gene16335 5.0kb downstream 5.0kb downstream 7865 true Tp57577_TGAC_v2_scaf_271: 123526-131390 Trifolium pratense
Tp57577_TGAC_v2_gene16335 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_271: 126391-131390 Trifolium pratense
Tp57577_TGAC_v2_gene16335 10.0kb upstream 10.0kb upstream 12865 true Tp57577_TGAC_v2_scaf_271: 113526-126390 Trifolium pratense
Tp57577_TGAC_v2_gene16335 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_271: 113526-123525 Trifolium pratense
Tp57577_TGAC_v2_gene16335 10.0kb downstream 10.0kb downstream 12865 true Tp57577_TGAC_v2_scaf_271: 123526-136390 Trifolium pratense
Tp57577_TGAC_v2_gene16335 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_271: 126391-136390 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300537 5265 Fabidae View MSA
124064887 5270 Rosid View MSA
123746932 5271 Pentapetalae View MSA
122792808 5272 Eudicot View MSA
122046027 5273 Angiosperm View MSA
121345659 5274 Embryophyte View MSA
123426333 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain