Gene : Tp57577_TGAC_v2_gene16336 T. pratense v2
Defline:  (1 of 2) PTHR33199:SF8 - MACPF DOMAIN-CONTAINING PROTEIN NSL1 Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene16336 Secondary Identifier:  ? PAC:35966777
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16336 0.5kb upstream 0.5kb upstream 4019 true Tp57577_TGAC_v2_scaf_271: 38727-42745 Trifolium pratense
Tp57577_TGAC_v2_gene16336 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_271: 42246-42745 Trifolium pratense
Tp57577_TGAC_v2_gene16336 0.5kb downstream 0.5kb downstream 4019 true Tp57577_TGAC_v2_scaf_271: 38227-42245 Trifolium pratense
Tp57577_TGAC_v2_gene16336 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_271: 38227-38726 Trifolium pratense
Tp57577_TGAC_v2_gene16336 1.0kb upstream 1.0kb upstream 4519 true Tp57577_TGAC_v2_scaf_271: 38727-43245 Trifolium pratense
Tp57577_TGAC_v2_gene16336 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_271: 42246-43245 Trifolium pratense
Tp57577_TGAC_v2_gene16336 1.0kb downstream 1.0kb downstream 4519 true Tp57577_TGAC_v2_scaf_271: 37727-42245 Trifolium pratense
Tp57577_TGAC_v2_gene16336 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_271: 37727-38726 Trifolium pratense
Tp57577_TGAC_v2_gene16336 2.0kb upstream 2.0kb upstream 5519 true Tp57577_TGAC_v2_scaf_271: 38727-44245 Trifolium pratense
Tp57577_TGAC_v2_gene16336 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_271: 42246-44245 Trifolium pratense
Tp57577_TGAC_v2_gene16336 2.0kb downstream 2.0kb downstream 5519 true Tp57577_TGAC_v2_scaf_271: 36727-42245 Trifolium pratense
Tp57577_TGAC_v2_gene16336 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_271: 36727-38726 Trifolium pratense
Tp57577_TGAC_v2_gene16336 5.0kb upstream 5.0kb upstream 8519 true Tp57577_TGAC_v2_scaf_271: 38727-47245 Trifolium pratense
Tp57577_TGAC_v2_gene16336 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_271: 42246-47245 Trifolium pratense
Tp57577_TGAC_v2_gene16336 5.0kb downstream 5.0kb downstream 8519 true Tp57577_TGAC_v2_scaf_271: 33727-42245 Trifolium pratense
Tp57577_TGAC_v2_gene16336 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_271: 33727-38726 Trifolium pratense
Tp57577_TGAC_v2_gene16336 10.0kb upstream 10.0kb upstream 13519 true Tp57577_TGAC_v2_scaf_271: 38727-52245 Trifolium pratense
Tp57577_TGAC_v2_gene16336 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_271: 42246-52245 Trifolium pratense
Tp57577_TGAC_v2_gene16336 10.0kb downstream 10.0kb downstream 13519 true Tp57577_TGAC_v2_scaf_271: 28727-42245 Trifolium pratense
Tp57577_TGAC_v2_gene16336 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_271: 28727-38726 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303313 5265 Fabidae View MSA
124061147 5270 Rosid View MSA
123738184 5271 Pentapetalae View MSA
122791371 5272 Eudicot View MSA
122048917 5273 Angiosperm View MSA
121311170 5274 Embryophyte View MSA
123348503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain