Gene : Tp57577_TGAC_v2_gene33989 T. pratense v2
Defline:  (1 of 3) PTHR10168:SF57 - GLUTAREDOXIN-C13-RELATED Genomic Order:  1335
Name:  ? Tp57577_TGAC_v2_gene33989 Secondary Identifier:  ? PAC:35978877
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense THIOREDOX-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene33989 0.5kb upstream 0.5kb upstream 1248 true Tp57577_TGAC_v2_LG1: 11013542-11014789 Trifolium pratense
Tp57577_TGAC_v2_gene33989 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 11013542-11014041 Trifolium pratense
Tp57577_TGAC_v2_gene33989 0.5kb downstream 0.5kb downstream 1248 true Tp57577_TGAC_v2_LG1: 11014042-11015289 Trifolium pratense
Tp57577_TGAC_v2_gene33989 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 11014790-11015289 Trifolium pratense
Tp57577_TGAC_v2_gene33989 1.0kb upstream 1.0kb upstream 1748 true Tp57577_TGAC_v2_LG1: 11013042-11014789 Trifolium pratense
Tp57577_TGAC_v2_gene33989 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 11013042-11014041 Trifolium pratense
Tp57577_TGAC_v2_gene33989 1.0kb downstream 1.0kb downstream 1748 true Tp57577_TGAC_v2_LG1: 11014042-11015789 Trifolium pratense
Tp57577_TGAC_v2_gene33989 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 11014790-11015789 Trifolium pratense
Tp57577_TGAC_v2_gene33989 2.0kb upstream 2.0kb upstream 2748 true Tp57577_TGAC_v2_LG1: 11012042-11014789 Trifolium pratense
Tp57577_TGAC_v2_gene33989 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 11012042-11014041 Trifolium pratense
Tp57577_TGAC_v2_gene33989 2.0kb downstream 2.0kb downstream 2748 true Tp57577_TGAC_v2_LG1: 11014042-11016789 Trifolium pratense
Tp57577_TGAC_v2_gene33989 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 11014790-11016789 Trifolium pratense
Tp57577_TGAC_v2_gene33989 5.0kb upstream 5.0kb upstream 5748 true Tp57577_TGAC_v2_LG1: 11009042-11014789 Trifolium pratense
Tp57577_TGAC_v2_gene33989 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 11009042-11014041 Trifolium pratense
Tp57577_TGAC_v2_gene33989 5.0kb downstream 5.0kb downstream 5748 true Tp57577_TGAC_v2_LG1: 11014042-11019789 Trifolium pratense
Tp57577_TGAC_v2_gene33989 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 11014790-11019789 Trifolium pratense
Tp57577_TGAC_v2_gene33989 10.0kb upstream 10.0kb upstream 10748 true Tp57577_TGAC_v2_LG1: 11004042-11014789 Trifolium pratense
Tp57577_TGAC_v2_gene33989 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 11004042-11014041 Trifolium pratense
Tp57577_TGAC_v2_gene33989 10.0kb downstream 10.0kb downstream 10748 true Tp57577_TGAC_v2_LG1: 11014042-11024789 Trifolium pratense
Tp57577_TGAC_v2_gene33989 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 11014790-11024789 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028026 5273 Angiosperm View MSA
122310435 5265 Fabidae View MSA
124060957 5270 Rosid View MSA
123747538 5271 Pentapetalae View MSA
122788985 5272 Eudicot View MSA
121297578 5274 Embryophyte View MSA
123335620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain