Gene : Tp57577_TGAC_v2_gene33993 T. pratense v2
Defline:  (1 of 14) PF02362//PF06507 - B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  1323
Name:  ? Tp57577_TGAC_v2_gene33993 Secondary Identifier:  ? PAC:35980072
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene33993 0.5kb upstream 0.5kb upstream 3696 true Tp57577_TGAC_v2_LG1: 10924582-10928277 Trifolium pratense
Tp57577_TGAC_v2_gene33993 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 10924582-10925081 Trifolium pratense
Tp57577_TGAC_v2_gene33993 0.5kb downstream 0.5kb downstream 3696 true Tp57577_TGAC_v2_LG1: 10925082-10928777 Trifolium pratense
Tp57577_TGAC_v2_gene33993 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 10928278-10928777 Trifolium pratense
Tp57577_TGAC_v2_gene33993 1.0kb upstream 1.0kb upstream 4196 true Tp57577_TGAC_v2_LG1: 10924082-10928277 Trifolium pratense
Tp57577_TGAC_v2_gene33993 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 10924082-10925081 Trifolium pratense
Tp57577_TGAC_v2_gene33993 1.0kb downstream 1.0kb downstream 4196 true Tp57577_TGAC_v2_LG1: 10925082-10929277 Trifolium pratense
Tp57577_TGAC_v2_gene33993 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 10928278-10929277 Trifolium pratense
Tp57577_TGAC_v2_gene33993 2.0kb upstream 2.0kb upstream 5196 true Tp57577_TGAC_v2_LG1: 10923082-10928277 Trifolium pratense
Tp57577_TGAC_v2_gene33993 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 10923082-10925081 Trifolium pratense
Tp57577_TGAC_v2_gene33993 2.0kb downstream 2.0kb downstream 5196 true Tp57577_TGAC_v2_LG1: 10925082-10930277 Trifolium pratense
Tp57577_TGAC_v2_gene33993 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 10928278-10930277 Trifolium pratense
Tp57577_TGAC_v2_gene33993 5.0kb upstream 5.0kb upstream 8196 true Tp57577_TGAC_v2_LG1: 10920082-10928277 Trifolium pratense
Tp57577_TGAC_v2_gene33993 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 10920082-10925081 Trifolium pratense
Tp57577_TGAC_v2_gene33993 5.0kb downstream 5.0kb downstream 8196 true Tp57577_TGAC_v2_LG1: 10925082-10933277 Trifolium pratense
Tp57577_TGAC_v2_gene33993 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 10928278-10933277 Trifolium pratense
Tp57577_TGAC_v2_gene33993 10.0kb upstream 10.0kb upstream 13196 true Tp57577_TGAC_v2_LG1: 10915082-10928277 Trifolium pratense
Tp57577_TGAC_v2_gene33993 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 10915082-10925081 Trifolium pratense
Tp57577_TGAC_v2_gene33993 10.0kb downstream 10.0kb downstream 13196 true Tp57577_TGAC_v2_LG1: 10925082-10938277 Trifolium pratense
Tp57577_TGAC_v2_gene33993 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 10928278-10938277 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289277 5265 Fabidae View MSA
124071222 5270 Rosid View MSA
123753340 5271 Pentapetalae View MSA
122797865 5272 Eudicot View MSA
122051660 5273 Angiosperm View MSA
121351445 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain