Gene : Tp57577_TGAC_v2_gene34005 T. pratense v2
Defline:  (1 of 1) PTHR10459//PTHR10459:SF59 - DNA LIGASE // SUBFAMILY NOT NAMED Genomic Order:  1300
Name:  ? Tp57577_TGAC_v2_gene34005 Secondary Identifier:  ? PAC:35979232
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene34005 0.5kb upstream 0.5kb upstream 8527 true Tp57577_TGAC_v2_LG1: 10676355-10684881 Trifolium pratense
Tp57577_TGAC_v2_gene34005 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 10684382-10684881 Trifolium pratense
Tp57577_TGAC_v2_gene34005 0.5kb downstream 0.5kb downstream 8527 true Tp57577_TGAC_v2_LG1: 10675855-10684381 Trifolium pratense
Tp57577_TGAC_v2_gene34005 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 10675855-10676354 Trifolium pratense
Tp57577_TGAC_v2_gene34005 1.0kb upstream 1.0kb upstream 9027 true Tp57577_TGAC_v2_LG1: 10676355-10685381 Trifolium pratense
Tp57577_TGAC_v2_gene34005 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 10684382-10685381 Trifolium pratense
Tp57577_TGAC_v2_gene34005 1.0kb downstream 1.0kb downstream 9027 true Tp57577_TGAC_v2_LG1: 10675355-10684381 Trifolium pratense
Tp57577_TGAC_v2_gene34005 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 10675355-10676354 Trifolium pratense
Tp57577_TGAC_v2_gene34005 2.0kb upstream 2.0kb upstream 10027 true Tp57577_TGAC_v2_LG1: 10676355-10686381 Trifolium pratense
Tp57577_TGAC_v2_gene34005 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 10684382-10686381 Trifolium pratense
Tp57577_TGAC_v2_gene34005 2.0kb downstream 2.0kb downstream 10027 true Tp57577_TGAC_v2_LG1: 10674355-10684381 Trifolium pratense
Tp57577_TGAC_v2_gene34005 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 10674355-10676354 Trifolium pratense
Tp57577_TGAC_v2_gene34005 5.0kb upstream 5.0kb upstream 13027 true Tp57577_TGAC_v2_LG1: 10676355-10689381 Trifolium pratense
Tp57577_TGAC_v2_gene34005 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 10684382-10689381 Trifolium pratense
Tp57577_TGAC_v2_gene34005 5.0kb downstream 5.0kb downstream 13027 true Tp57577_TGAC_v2_LG1: 10671355-10684381 Trifolium pratense
Tp57577_TGAC_v2_gene34005 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 10671355-10676354 Trifolium pratense
Tp57577_TGAC_v2_gene34005 10.0kb upstream 10.0kb upstream 18027 true Tp57577_TGAC_v2_LG1: 10676355-10694381 Trifolium pratense
Tp57577_TGAC_v2_gene34005 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 10684382-10694381 Trifolium pratense
Tp57577_TGAC_v2_gene34005 10.0kb downstream 10.0kb downstream 18027 true Tp57577_TGAC_v2_LG1: 10666355-10684381 Trifolium pratense
Tp57577_TGAC_v2_gene34005 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 10666355-10676354 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308517 5265 Fabidae View MSA
124074369 5270 Rosid View MSA
123750076 5271 Pentapetalae View MSA
122797319 5272 Eudicot View MSA
122051365 5273 Angiosperm View MSA
121345540 5274 Embryophyte View MSA
123380235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain