Gene : Tp57577_TGAC_v2_gene16341 T. pratense v2
Defline:  (1 of 34) PF05678 - VQ motif (VQ) Genomic Order:  27
Name:  ? Tp57577_TGAC_v2_gene16341 Secondary Identifier:  ? PAC:35966783
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16341 0.5kb upstream 0.5kb upstream 8010 true Tp57577_TGAC_v2_scaf_271: 186626-194635 Trifolium pratense
Tp57577_TGAC_v2_gene16341 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_271: 194136-194635 Trifolium pratense
Tp57577_TGAC_v2_gene16341 0.5kb downstream 0.5kb downstream 8010 true Tp57577_TGAC_v2_scaf_271: 186126-194135 Trifolium pratense
Tp57577_TGAC_v2_gene16341 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_271: 186126-186625 Trifolium pratense
Tp57577_TGAC_v2_gene16341 1.0kb upstream 1.0kb upstream 8510 true Tp57577_TGAC_v2_scaf_271: 186626-195135 Trifolium pratense
Tp57577_TGAC_v2_gene16341 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_271: 194136-195135 Trifolium pratense
Tp57577_TGAC_v2_gene16341 1.0kb downstream 1.0kb downstream 8510 true Tp57577_TGAC_v2_scaf_271: 185626-194135 Trifolium pratense
Tp57577_TGAC_v2_gene16341 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_271: 185626-186625 Trifolium pratense
Tp57577_TGAC_v2_gene16341 2.0kb upstream 2.0kb upstream 9510 true Tp57577_TGAC_v2_scaf_271: 186626-196135 Trifolium pratense
Tp57577_TGAC_v2_gene16341 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_271: 194136-196135 Trifolium pratense
Tp57577_TGAC_v2_gene16341 2.0kb downstream 2.0kb downstream 9510 true Tp57577_TGAC_v2_scaf_271: 184626-194135 Trifolium pratense
Tp57577_TGAC_v2_gene16341 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_271: 184626-186625 Trifolium pratense
Tp57577_TGAC_v2_gene16341 5.0kb upstream 5.0kb upstream 12510 true Tp57577_TGAC_v2_scaf_271: 186626-199135 Trifolium pratense
Tp57577_TGAC_v2_gene16341 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_271: 194136-199135 Trifolium pratense
Tp57577_TGAC_v2_gene16341 5.0kb downstream 5.0kb downstream 12510 true Tp57577_TGAC_v2_scaf_271: 181626-194135 Trifolium pratense
Tp57577_TGAC_v2_gene16341 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_271: 181626-186625 Trifolium pratense
Tp57577_TGAC_v2_gene16341 10.0kb upstream 10.0kb upstream 17510 true Tp57577_TGAC_v2_scaf_271: 186626-204135 Trifolium pratense
Tp57577_TGAC_v2_gene16341 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_271: 194136-204135 Trifolium pratense
Tp57577_TGAC_v2_gene16341 10.0kb downstream 10.0kb downstream 17510 true Tp57577_TGAC_v2_scaf_271: 176626-194135 Trifolium pratense
Tp57577_TGAC_v2_gene16341 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_271: 176626-186625 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307242 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain