Gene : Tp57577_TGAC_v2_gene33977 T. pratense v2
Defline:  (1 of 1) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  1279
Name:  ? Tp57577_TGAC_v2_gene33977 Secondary Identifier:  ? PAC:35981403
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5464 Trifolium pratense pathologic  
Tpratense PWY-561 Trifolium pratense pathologic  
Tpratense PWY-5690 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene33977 0.5kb upstream 0.5kb upstream 7175 true Tp57577_TGAC_v2_LG1: 10547863-10555037 Trifolium pratense
Tp57577_TGAC_v2_gene33977 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 10547863-10548362 Trifolium pratense
Tp57577_TGAC_v2_gene33977 0.5kb downstream 0.5kb downstream 7175 true Tp57577_TGAC_v2_LG1: 10548363-10555537 Trifolium pratense
Tp57577_TGAC_v2_gene33977 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 10555038-10555537 Trifolium pratense
Tp57577_TGAC_v2_gene33977 1.0kb upstream 1.0kb upstream 7675 true Tp57577_TGAC_v2_LG1: 10547363-10555037 Trifolium pratense
Tp57577_TGAC_v2_gene33977 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 10547363-10548362 Trifolium pratense
Tp57577_TGAC_v2_gene33977 1.0kb downstream 1.0kb downstream 7675 true Tp57577_TGAC_v2_LG1: 10548363-10556037 Trifolium pratense
Tp57577_TGAC_v2_gene33977 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 10555038-10556037 Trifolium pratense
Tp57577_TGAC_v2_gene33977 2.0kb upstream 2.0kb upstream 8675 true Tp57577_TGAC_v2_LG1: 10546363-10555037 Trifolium pratense
Tp57577_TGAC_v2_gene33977 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 10546363-10548362 Trifolium pratense
Tp57577_TGAC_v2_gene33977 2.0kb downstream 2.0kb downstream 8675 true Tp57577_TGAC_v2_LG1: 10548363-10557037 Trifolium pratense
Tp57577_TGAC_v2_gene33977 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 10555038-10557037 Trifolium pratense
Tp57577_TGAC_v2_gene33977 5.0kb upstream 5.0kb upstream 11675 true Tp57577_TGAC_v2_LG1: 10543363-10555037 Trifolium pratense
Tp57577_TGAC_v2_gene33977 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 10543363-10548362 Trifolium pratense
Tp57577_TGAC_v2_gene33977 5.0kb downstream 5.0kb downstream 11675 true Tp57577_TGAC_v2_LG1: 10548363-10560037 Trifolium pratense
Tp57577_TGAC_v2_gene33977 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 10555038-10560037 Trifolium pratense
Tp57577_TGAC_v2_gene33977 10.0kb upstream 10.0kb upstream 16675 true Tp57577_TGAC_v2_LG1: 10538363-10555037 Trifolium pratense
Tp57577_TGAC_v2_gene33977 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 10538363-10548362 Trifolium pratense
Tp57577_TGAC_v2_gene33977 10.0kb downstream 10.0kb downstream 16675 true Tp57577_TGAC_v2_LG1: 10548363-10565037 Trifolium pratense
Tp57577_TGAC_v2_gene33977 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 10555038-10565037 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307847 5265 Fabidae View MSA
124069053 5270 Rosid View MSA
123742189 5271 Pentapetalae View MSA
122791396 5272 Eudicot View MSA
122047120 5273 Angiosperm View MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain