Gene : Tp57577_TGAC_v2_gene40292 T. pratense v2
Defline:  (1 of 5) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene40292 Secondary Identifier:  ? PAC:35954090
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7279 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene40292 0.5kb upstream 0.5kb upstream 4151 true Tp57577_TGAC_v2_scaf_2735: 626-4776 Trifolium pratense
Tp57577_TGAC_v2_gene40292 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_2735: 4277-4776 Trifolium pratense
Tp57577_TGAC_v2_gene40292 0.5kb downstream 0.5kb downstream 4151 true Tp57577_TGAC_v2_scaf_2735: 126-4276 Trifolium pratense
Tp57577_TGAC_v2_gene40292 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_2735: 126-625 Trifolium pratense
Tp57577_TGAC_v2_gene40292 1.0kb upstream 1.0kb upstream 4232 true Tp57577_TGAC_v2_scaf_2735: 626-4857 Trifolium pratense
Tp57577_TGAC_v2_gene40292 1.0kb upstream 1.0kb upstream 581 false Tp57577_TGAC_v2_scaf_2735: 4277-4857 Trifolium pratense
Tp57577_TGAC_v2_gene40292 1.0kb downstream 1.0kb downstream 4276 true Tp57577_TGAC_v2_scaf_2735: 1-4276 Trifolium pratense
Tp57577_TGAC_v2_gene40292 1.0kb downstream 1.0kb downstream 625 false Tp57577_TGAC_v2_scaf_2735: 1-625 Trifolium pratense
Tp57577_TGAC_v2_gene40292 2.0kb upstream 2.0kb upstream 4232 true Tp57577_TGAC_v2_scaf_2735: 626-4857 Trifolium pratense
Tp57577_TGAC_v2_gene40292 2.0kb upstream 2.0kb upstream 581 false Tp57577_TGAC_v2_scaf_2735: 4277-4857 Trifolium pratense
Tp57577_TGAC_v2_gene40292 2.0kb downstream 2.0kb downstream 4276 true Tp57577_TGAC_v2_scaf_2735: 1-4276 Trifolium pratense
Tp57577_TGAC_v2_gene40292 2.0kb downstream 2.0kb downstream 625 false Tp57577_TGAC_v2_scaf_2735: 1-625 Trifolium pratense
Tp57577_TGAC_v2_gene40292 5.0kb upstream 5.0kb upstream 4232 true Tp57577_TGAC_v2_scaf_2735: 626-4857 Trifolium pratense
Tp57577_TGAC_v2_gene40292 5.0kb upstream 5.0kb upstream 581 false Tp57577_TGAC_v2_scaf_2735: 4277-4857 Trifolium pratense
Tp57577_TGAC_v2_gene40292 5.0kb downstream 5.0kb downstream 4276 true Tp57577_TGAC_v2_scaf_2735: 1-4276 Trifolium pratense
Tp57577_TGAC_v2_gene40292 5.0kb downstream 5.0kb downstream 625 false Tp57577_TGAC_v2_scaf_2735: 1-625 Trifolium pratense
Tp57577_TGAC_v2_gene40292 10.0kb upstream 10.0kb upstream 4232 true Tp57577_TGAC_v2_scaf_2735: 626-4857 Trifolium pratense
Tp57577_TGAC_v2_gene40292 10.0kb upstream 10.0kb upstream 581 false Tp57577_TGAC_v2_scaf_2735: 4277-4857 Trifolium pratense
Tp57577_TGAC_v2_gene40292 10.0kb downstream 10.0kb downstream 4276 true Tp57577_TGAC_v2_scaf_2735: 1-4276 Trifolium pratense
Tp57577_TGAC_v2_gene40292 10.0kb downstream 10.0kb downstream 625 false Tp57577_TGAC_v2_scaf_2735: 1-625 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311284 5265 Fabidae View MSA
124072571 5270 Rosid View MSA
123740807 5271 Pentapetalae View MSA
122787456 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain