Gene : Tp57577_TGAC_v2_gene34365 T. pratense v2
Defline:  (1 of 1) K10863 - aprataxin [EC:3.-.-.-] (APTX) Genomic Order:  3035
Name:  ? Tp57577_TGAC_v2_gene34365 Secondary Identifier:  ? PAC:35979528
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene34365 0.5kb upstream 0.5kb upstream 4593 true Tp57577_TGAC_v2_LG1: 25750012-25754604 Trifolium pratense
Tp57577_TGAC_v2_gene34365 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 25750012-25750511 Trifolium pratense
Tp57577_TGAC_v2_gene34365 0.5kb downstream 0.5kb downstream 4593 true Tp57577_TGAC_v2_LG1: 25750512-25755104 Trifolium pratense
Tp57577_TGAC_v2_gene34365 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 25754605-25755104 Trifolium pratense
Tp57577_TGAC_v2_gene34365 1.0kb upstream 1.0kb upstream 5093 true Tp57577_TGAC_v2_LG1: 25749512-25754604 Trifolium pratense
Tp57577_TGAC_v2_gene34365 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 25749512-25750511 Trifolium pratense
Tp57577_TGAC_v2_gene34365 1.0kb downstream 1.0kb downstream 5093 true Tp57577_TGAC_v2_LG1: 25750512-25755604 Trifolium pratense
Tp57577_TGAC_v2_gene34365 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 25754605-25755604 Trifolium pratense
Tp57577_TGAC_v2_gene34365 2.0kb upstream 2.0kb upstream 6093 true Tp57577_TGAC_v2_LG1: 25748512-25754604 Trifolium pratense
Tp57577_TGAC_v2_gene34365 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 25748512-25750511 Trifolium pratense
Tp57577_TGAC_v2_gene34365 2.0kb downstream 2.0kb downstream 6093 true Tp57577_TGAC_v2_LG1: 25750512-25756604 Trifolium pratense
Tp57577_TGAC_v2_gene34365 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 25754605-25756604 Trifolium pratense
Tp57577_TGAC_v2_gene34365 5.0kb upstream 5.0kb upstream 9093 true Tp57577_TGAC_v2_LG1: 25745512-25754604 Trifolium pratense
Tp57577_TGAC_v2_gene34365 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 25745512-25750511 Trifolium pratense
Tp57577_TGAC_v2_gene34365 5.0kb downstream 5.0kb downstream 9093 true Tp57577_TGAC_v2_LG1: 25750512-25759604 Trifolium pratense
Tp57577_TGAC_v2_gene34365 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 25754605-25759604 Trifolium pratense
Tp57577_TGAC_v2_gene34365 10.0kb upstream 10.0kb upstream 14093 true Tp57577_TGAC_v2_LG1: 25740512-25754604 Trifolium pratense
Tp57577_TGAC_v2_gene34365 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 25740512-25750511 Trifolium pratense
Tp57577_TGAC_v2_gene34365 10.0kb downstream 10.0kb downstream 14093 true Tp57577_TGAC_v2_LG1: 25750512-25764604 Trifolium pratense
Tp57577_TGAC_v2_gene34365 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 25754605-25764604 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300907 5265 Fabidae View MSA
124068134 5270 Rosid View MSA
123738635 5271 Pentapetalae View MSA
122788277 5272 Eudicot View MSA
122043301 5273 Angiosperm View MSA
121345852 5274 Embryophyte View MSA
123423994 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain