Gene : Tp57577_TGAC_v2_gene29269 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene29269 Secondary Identifier:  ? PAC:35954645
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene29269 0.5kb upstream 0.5kb upstream 2680 true Tp57577_TGAC_v2_scaf_2723: 156-2835 Trifolium pratense
Tp57577_TGAC_v2_gene29269 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_2723: 156-655 Trifolium pratense
Tp57577_TGAC_v2_gene29269 0.5kb downstream 0.5kb downstream 2680 true Tp57577_TGAC_v2_scaf_2723: 656-3335 Trifolium pratense
Tp57577_TGAC_v2_gene29269 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_2723: 2836-3335 Trifolium pratense
Tp57577_TGAC_v2_gene29269 1.0kb upstream 1.0kb upstream 2835 true Tp57577_TGAC_v2_scaf_2723: 1-2835 Trifolium pratense
Tp57577_TGAC_v2_gene29269 1.0kb upstream 1.0kb upstream 655 false Tp57577_TGAC_v2_scaf_2723: 1-655 Trifolium pratense
Tp57577_TGAC_v2_gene29269 1.0kb downstream 1.0kb downstream 3180 true Tp57577_TGAC_v2_scaf_2723: 656-3835 Trifolium pratense
Tp57577_TGAC_v2_gene29269 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_2723: 2836-3835 Trifolium pratense
Tp57577_TGAC_v2_gene29269 2.0kb upstream 2.0kb upstream 2835 true Tp57577_TGAC_v2_scaf_2723: 1-2835 Trifolium pratense
Tp57577_TGAC_v2_gene29269 2.0kb upstream 2.0kb upstream 655 false Tp57577_TGAC_v2_scaf_2723: 1-655 Trifolium pratense
Tp57577_TGAC_v2_gene29269 2.0kb downstream 2.0kb downstream 4180 true Tp57577_TGAC_v2_scaf_2723: 656-4835 Trifolium pratense
Tp57577_TGAC_v2_gene29269 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_2723: 2836-4835 Trifolium pratense
Tp57577_TGAC_v2_gene29269 5.0kb upstream 5.0kb upstream 2835 true Tp57577_TGAC_v2_scaf_2723: 1-2835 Trifolium pratense
Tp57577_TGAC_v2_gene29269 5.0kb upstream 5.0kb upstream 655 false Tp57577_TGAC_v2_scaf_2723: 1-655 Trifolium pratense
Tp57577_TGAC_v2_gene29269 5.0kb downstream 5.0kb downstream 4238 true Tp57577_TGAC_v2_scaf_2723: 656-4893 Trifolium pratense
Tp57577_TGAC_v2_gene29269 5.0kb downstream 5.0kb downstream 2058 false Tp57577_TGAC_v2_scaf_2723: 2836-4893 Trifolium pratense
Tp57577_TGAC_v2_gene29269 10.0kb upstream 10.0kb upstream 2835 true Tp57577_TGAC_v2_scaf_2723: 1-2835 Trifolium pratense
Tp57577_TGAC_v2_gene29269 10.0kb upstream 10.0kb upstream 655 false Tp57577_TGAC_v2_scaf_2723: 1-655 Trifolium pratense
Tp57577_TGAC_v2_gene29269 10.0kb downstream 10.0kb downstream 4238 true Tp57577_TGAC_v2_scaf_2723: 656-4893 Trifolium pratense
Tp57577_TGAC_v2_gene29269 10.0kb downstream 10.0kb downstream 2058 false Tp57577_TGAC_v2_scaf_2723: 2836-4893 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307922 5265 Fabidae View MSA
124064149 5270 Rosid View MSA
123753301 5271 Pentapetalae View MSA
122789942 5272 Eudicot View MSA
122043539 5273 Angiosperm View MSA
121344903 5274 Embryophyte View MSA
123380125 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain