Gene : Tp57577_TGAC_v2_gene7798 T. pratense v2
Defline:  (1 of 3) PTHR21660:SF6 - F19P19.27 PROTEIN Genomic Order:  22
Name:  ? Tp57577_TGAC_v2_gene7798 Secondary Identifier:  ? PAC:35959248
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1121 Trifolium pratense pathologic  
Tpratense PWY-321 Trifolium pratense pathologic  
Tpratense PWY-5148 Trifolium pratense pathologic  
Tpratense PWY-6733 Trifolium pratense pathologic  
Tpratense PWY-735 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene7798 0.5kb upstream 0.5kb upstream 4392 true Tp57577_TGAC_v2_scaf_291: 121706-126097 Trifolium pratense
Tp57577_TGAC_v2_gene7798 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_291: 121706-122205 Trifolium pratense
Tp57577_TGAC_v2_gene7798 0.5kb downstream 0.5kb downstream 4392 true Tp57577_TGAC_v2_scaf_291: 122206-126597 Trifolium pratense
Tp57577_TGAC_v2_gene7798 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_291: 126098-126597 Trifolium pratense
Tp57577_TGAC_v2_gene7798 1.0kb upstream 1.0kb upstream 4892 true Tp57577_TGAC_v2_scaf_291: 121206-126097 Trifolium pratense
Tp57577_TGAC_v2_gene7798 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_291: 121206-122205 Trifolium pratense
Tp57577_TGAC_v2_gene7798 1.0kb downstream 1.0kb downstream 4892 true Tp57577_TGAC_v2_scaf_291: 122206-127097 Trifolium pratense
Tp57577_TGAC_v2_gene7798 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_291: 126098-127097 Trifolium pratense
Tp57577_TGAC_v2_gene7798 2.0kb upstream 2.0kb upstream 5892 true Tp57577_TGAC_v2_scaf_291: 120206-126097 Trifolium pratense
Tp57577_TGAC_v2_gene7798 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_291: 120206-122205 Trifolium pratense
Tp57577_TGAC_v2_gene7798 2.0kb downstream 2.0kb downstream 5892 true Tp57577_TGAC_v2_scaf_291: 122206-128097 Trifolium pratense
Tp57577_TGAC_v2_gene7798 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_291: 126098-128097 Trifolium pratense
Tp57577_TGAC_v2_gene7798 5.0kb upstream 5.0kb upstream 8892 true Tp57577_TGAC_v2_scaf_291: 117206-126097 Trifolium pratense
Tp57577_TGAC_v2_gene7798 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_291: 117206-122205 Trifolium pratense
Tp57577_TGAC_v2_gene7798 5.0kb downstream 5.0kb downstream 8892 true Tp57577_TGAC_v2_scaf_291: 122206-131097 Trifolium pratense
Tp57577_TGAC_v2_gene7798 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_291: 126098-131097 Trifolium pratense
Tp57577_TGAC_v2_gene7798 10.0kb upstream 10.0kb upstream 13892 true Tp57577_TGAC_v2_scaf_291: 112206-126097 Trifolium pratense
Tp57577_TGAC_v2_gene7798 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_291: 112206-122205 Trifolium pratense
Tp57577_TGAC_v2_gene7798 10.0kb downstream 10.0kb downstream 13892 true Tp57577_TGAC_v2_scaf_291: 122206-136097 Trifolium pratense
Tp57577_TGAC_v2_gene7798 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_291: 126098-136097 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307118 5265 Fabidae View MSA
124063783 5270 Rosid View MSA
123750481 5271 Pentapetalae View MSA
122787184 5272 Eudicot View MSA
122043705 5273 Angiosperm View MSA
121345326 5274 Embryophyte View MSA
123428627 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain