Gene : Tp57577_TGAC_v2_gene18056 T. pratense v2

Defline:  (1 of 2) PF09430 - Protein of unknown function (DUF2012) (DUF2012) Genomic Order:  23
Name:  ? Tp57577_TGAC_v2_gene18056 Secondary Identifier:  ? PAC:35954988

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene18056 0.5kb upstream 0.5kb upstream 3782 true Tp57577_TGAC_v2_scaf_350: 182066-185847 Trifolium pratense
Tp57577_TGAC_v2_gene18056 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_350: 182066-182565 Trifolium pratense
Tp57577_TGAC_v2_gene18056 0.5kb downstream 0.5kb downstream 3782 true Tp57577_TGAC_v2_scaf_350: 182566-186347 Trifolium pratense
Tp57577_TGAC_v2_gene18056 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_350: 185848-186347 Trifolium pratense
Tp57577_TGAC_v2_gene18056 1.0kb upstream 1.0kb upstream 4282 true Tp57577_TGAC_v2_scaf_350: 181566-185847 Trifolium pratense
Tp57577_TGAC_v2_gene18056 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_350: 181566-182565 Trifolium pratense
Tp57577_TGAC_v2_gene18056 1.0kb downstream 1.0kb downstream 4282 true Tp57577_TGAC_v2_scaf_350: 182566-186847 Trifolium pratense
Tp57577_TGAC_v2_gene18056 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_350: 185848-186847 Trifolium pratense
Tp57577_TGAC_v2_gene18056 2.0kb upstream 2.0kb upstream 5282 true Tp57577_TGAC_v2_scaf_350: 180566-185847 Trifolium pratense
Tp57577_TGAC_v2_gene18056 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_350: 180566-182565 Trifolium pratense
Tp57577_TGAC_v2_gene18056 2.0kb downstream 2.0kb downstream 5282 true Tp57577_TGAC_v2_scaf_350: 182566-187847 Trifolium pratense
Tp57577_TGAC_v2_gene18056 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_350: 185848-187847 Trifolium pratense
Tp57577_TGAC_v2_gene18056 5.0kb upstream 5.0kb upstream 8282 true Tp57577_TGAC_v2_scaf_350: 177566-185847 Trifolium pratense
Tp57577_TGAC_v2_gene18056 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_350: 177566-182565 Trifolium pratense
Tp57577_TGAC_v2_gene18056 5.0kb downstream 5.0kb downstream 8282 true Tp57577_TGAC_v2_scaf_350: 182566-190847 Trifolium pratense
Tp57577_TGAC_v2_gene18056 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_350: 185848-190847 Trifolium pratense
Tp57577_TGAC_v2_gene18056 10.0kb upstream 10.0kb upstream 13282 true Tp57577_TGAC_v2_scaf_350: 172566-185847 Trifolium pratense
Tp57577_TGAC_v2_gene18056 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_350: 172566-182565 Trifolium pratense
Tp57577_TGAC_v2_gene18056 10.0kb downstream 10.0kb downstream 13282 true Tp57577_TGAC_v2_scaf_350: 182566-195847 Trifolium pratense
Tp57577_TGAC_v2_gene18056 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_350: 185848-195847 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304302 5265 Fabidae View MSA
124061047 5270 Rosid View MSA
123750181 5271 Pentapetalae View MSA
122793611 5272 Eudicot View MSA
122047015 5273 Angiosperm View MSA
121345754 5274 Embryophyte View MSA
123424414 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain