Gene : Tp57577_TGAC_v2_gene13746 T. pratense v2
Defline:  (1 of 1) PTHR23118//PTHR23118:SF3 - ATP-CITRATE SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  16
Name:  ? Tp57577_TGAC_v2_gene13746 Secondary Identifier:  ? PAC:35968356
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5172 Trifolium pratense pathologic  
Tpratense PWY-5173 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13746 0.5kb upstream 0.5kb upstream 6991 true Tp57577_TGAC_v2_scaf_427: 149856-156846 Trifolium pratense
Tp57577_TGAC_v2_gene13746 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_427: 149856-150355 Trifolium pratense
Tp57577_TGAC_v2_gene13746 0.5kb downstream 0.5kb downstream 6991 true Tp57577_TGAC_v2_scaf_427: 150356-157346 Trifolium pratense
Tp57577_TGAC_v2_gene13746 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_427: 156847-157346 Trifolium pratense
Tp57577_TGAC_v2_gene13746 1.0kb upstream 1.0kb upstream 7491 true Tp57577_TGAC_v2_scaf_427: 149356-156846 Trifolium pratense
Tp57577_TGAC_v2_gene13746 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_427: 149356-150355 Trifolium pratense
Tp57577_TGAC_v2_gene13746 1.0kb downstream 1.0kb downstream 7491 true Tp57577_TGAC_v2_scaf_427: 150356-157846 Trifolium pratense
Tp57577_TGAC_v2_gene13746 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_427: 156847-157846 Trifolium pratense
Tp57577_TGAC_v2_gene13746 2.0kb upstream 2.0kb upstream 8491 true Tp57577_TGAC_v2_scaf_427: 148356-156846 Trifolium pratense
Tp57577_TGAC_v2_gene13746 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_427: 148356-150355 Trifolium pratense
Tp57577_TGAC_v2_gene13746 2.0kb downstream 2.0kb downstream 8491 true Tp57577_TGAC_v2_scaf_427: 150356-158846 Trifolium pratense
Tp57577_TGAC_v2_gene13746 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_427: 156847-158846 Trifolium pratense
Tp57577_TGAC_v2_gene13746 5.0kb upstream 5.0kb upstream 11491 true Tp57577_TGAC_v2_scaf_427: 145356-156846 Trifolium pratense
Tp57577_TGAC_v2_gene13746 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_427: 145356-150355 Trifolium pratense
Tp57577_TGAC_v2_gene13746 5.0kb downstream 5.0kb downstream 11491 true Tp57577_TGAC_v2_scaf_427: 150356-161846 Trifolium pratense
Tp57577_TGAC_v2_gene13746 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_427: 156847-161846 Trifolium pratense
Tp57577_TGAC_v2_gene13746 10.0kb upstream 10.0kb upstream 16491 true Tp57577_TGAC_v2_scaf_427: 140356-156846 Trifolium pratense
Tp57577_TGAC_v2_gene13746 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_427: 140356-150355 Trifolium pratense
Tp57577_TGAC_v2_gene13746 10.0kb downstream 10.0kb downstream 16491 true Tp57577_TGAC_v2_scaf_427: 150356-166846 Trifolium pratense
Tp57577_TGAC_v2_gene13746 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_427: 156847-166846 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312569 5265 Fabidae View MSA
124062088 5270 Rosid View MSA
123736971 5271 Pentapetalae View MSA
122787632 5272 Eudicot View MSA
122045238 5273 Angiosperm View MSA
121345896 5274 Embryophyte View MSA
123427786 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain