Gene : Tp57577_TGAC_v2_gene7845 T. pratense v2
Defline:  (1 of 1) PTHR10314:SF90 - S-SULFOCYSTEINE SYNTHASE, CHLOROPLASTIC-RELATED Genomic Order:  23
Name:  ? Tp57577_TGAC_v2_gene7845 Secondary Identifier:  ? PAC:35976784
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CYSTSYN-PWY Trifolium pratense pathologic  
Tpratense PWY-6936 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene7845 0.5kb upstream 0.5kb upstream 5995 true Tp57577_TGAC_v2_scaf_290: 222461-228455 Trifolium pratense
Tp57577_TGAC_v2_gene7845 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_290: 227956-228455 Trifolium pratense
Tp57577_TGAC_v2_gene7845 0.5kb downstream 0.5kb downstream 5995 true Tp57577_TGAC_v2_scaf_290: 221961-227955 Trifolium pratense
Tp57577_TGAC_v2_gene7845 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_290: 221961-222460 Trifolium pratense
Tp57577_TGAC_v2_gene7845 1.0kb upstream 1.0kb upstream 6495 true Tp57577_TGAC_v2_scaf_290: 222461-228955 Trifolium pratense
Tp57577_TGAC_v2_gene7845 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_290: 227956-228955 Trifolium pratense
Tp57577_TGAC_v2_gene7845 1.0kb downstream 1.0kb downstream 6495 true Tp57577_TGAC_v2_scaf_290: 221461-227955 Trifolium pratense
Tp57577_TGAC_v2_gene7845 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_290: 221461-222460 Trifolium pratense
Tp57577_TGAC_v2_gene7845 2.0kb upstream 2.0kb upstream 7495 true Tp57577_TGAC_v2_scaf_290: 222461-229955 Trifolium pratense
Tp57577_TGAC_v2_gene7845 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_290: 227956-229955 Trifolium pratense
Tp57577_TGAC_v2_gene7845 2.0kb downstream 2.0kb downstream 7495 true Tp57577_TGAC_v2_scaf_290: 220461-227955 Trifolium pratense
Tp57577_TGAC_v2_gene7845 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_290: 220461-222460 Trifolium pratense
Tp57577_TGAC_v2_gene7845 5.0kb upstream 5.0kb upstream 10495 true Tp57577_TGAC_v2_scaf_290: 222461-232955 Trifolium pratense
Tp57577_TGAC_v2_gene7845 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_290: 227956-232955 Trifolium pratense
Tp57577_TGAC_v2_gene7845 5.0kb downstream 5.0kb downstream 10495 true Tp57577_TGAC_v2_scaf_290: 217461-227955 Trifolium pratense
Tp57577_TGAC_v2_gene7845 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_290: 217461-222460 Trifolium pratense
Tp57577_TGAC_v2_gene7845 10.0kb upstream 10.0kb upstream 15495 true Tp57577_TGAC_v2_scaf_290: 222461-237955 Trifolium pratense
Tp57577_TGAC_v2_gene7845 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_290: 227956-237955 Trifolium pratense
Tp57577_TGAC_v2_gene7845 10.0kb downstream 10.0kb downstream 15495 true Tp57577_TGAC_v2_scaf_290: 212461-227955 Trifolium pratense
Tp57577_TGAC_v2_gene7845 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_290: 212461-222460 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302417 5265 Fabidae View MSA
124067965 5270 Rosid View MSA
123741617 5271 Pentapetalae View MSA
122788921 5272 Eudicot View MSA
122042312 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain