Gene : Tp57577_TGAC_v2_gene3281 T. pratense v2
Defline:  (1 of 4) K01611 - S-adenosylmethionine decarboxylase (speD, AMD1) Genomic Order:  61
Name:  ? Tp57577_TGAC_v2_gene3281 Secondary Identifier:  ? PAC:35958757
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ARGSPECAT-PWY Trifolium pratense pathologic  
Tpratense BSUBPOLYAMSYN-PWY Trifolium pratense pathologic  
Tpratense POLYAMINSYN3-PWY Trifolium pratense pathologic  
Tpratense PWY-7528 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3281 0.5kb upstream 0.5kb upstream 5592 true Tp57577_TGAC_v2_scaf_82: 458474-464065 Trifolium pratense
Tp57577_TGAC_v2_gene3281 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_82: 463566-464065 Trifolium pratense
Tp57577_TGAC_v2_gene3281 0.5kb downstream 0.5kb downstream 5592 true Tp57577_TGAC_v2_scaf_82: 457974-463565 Trifolium pratense
Tp57577_TGAC_v2_gene3281 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_82: 457974-458473 Trifolium pratense
Tp57577_TGAC_v2_gene3281 1.0kb upstream 1.0kb upstream 6092 true Tp57577_TGAC_v2_scaf_82: 458474-464565 Trifolium pratense
Tp57577_TGAC_v2_gene3281 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_82: 463566-464565 Trifolium pratense
Tp57577_TGAC_v2_gene3281 1.0kb downstream 1.0kb downstream 6092 true Tp57577_TGAC_v2_scaf_82: 457474-463565 Trifolium pratense
Tp57577_TGAC_v2_gene3281 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_82: 457474-458473 Trifolium pratense
Tp57577_TGAC_v2_gene3281 2.0kb upstream 2.0kb upstream 7092 true Tp57577_TGAC_v2_scaf_82: 458474-465565 Trifolium pratense
Tp57577_TGAC_v2_gene3281 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_82: 463566-465565 Trifolium pratense
Tp57577_TGAC_v2_gene3281 2.0kb downstream 2.0kb downstream 7092 true Tp57577_TGAC_v2_scaf_82: 456474-463565 Trifolium pratense
Tp57577_TGAC_v2_gene3281 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_82: 456474-458473 Trifolium pratense
Tp57577_TGAC_v2_gene3281 5.0kb upstream 5.0kb upstream 10092 true Tp57577_TGAC_v2_scaf_82: 458474-468565 Trifolium pratense
Tp57577_TGAC_v2_gene3281 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_82: 463566-468565 Trifolium pratense
Tp57577_TGAC_v2_gene3281 5.0kb downstream 5.0kb downstream 10092 true Tp57577_TGAC_v2_scaf_82: 453474-463565 Trifolium pratense
Tp57577_TGAC_v2_gene3281 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_82: 453474-458473 Trifolium pratense
Tp57577_TGAC_v2_gene3281 10.0kb upstream 10.0kb upstream 15092 true Tp57577_TGAC_v2_scaf_82: 458474-473565 Trifolium pratense
Tp57577_TGAC_v2_gene3281 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_82: 463566-473565 Trifolium pratense
Tp57577_TGAC_v2_gene3281 10.0kb downstream 10.0kb downstream 15092 true Tp57577_TGAC_v2_scaf_82: 448474-463565 Trifolium pratense
Tp57577_TGAC_v2_gene3281 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_82: 448474-458473 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299314 5265 Fabidae View MSA
124073000 5270 Rosid View MSA
123746333 5271 Pentapetalae View MSA
122785858 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain