Gene : Tp57577_TGAC_v2_gene3239 T. pratense v2
Defline:  (1 of 2) K00899 - 5-methylthioribose kinase (mtnK) Genomic Order:  16
Name:  ? Tp57577_TGAC_v2_gene3239 Secondary Identifier:  ? PAC:35958773
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6754 Trifolium pratense pathologic  
Tpratense PWY-7270 Trifolium pratense pathologic  
Tpratense PWY-7528 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3239 0.5kb upstream 0.5kb upstream 4708 true Tp57577_TGAC_v2_scaf_82: 83725-88432 Trifolium pratense
Tp57577_TGAC_v2_gene3239 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_82: 83725-84224 Trifolium pratense
Tp57577_TGAC_v2_gene3239 0.5kb downstream 0.5kb downstream 4708 true Tp57577_TGAC_v2_scaf_82: 84225-88932 Trifolium pratense
Tp57577_TGAC_v2_gene3239 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_82: 88433-88932 Trifolium pratense
Tp57577_TGAC_v2_gene3239 1.0kb upstream 1.0kb upstream 5208 true Tp57577_TGAC_v2_scaf_82: 83225-88432 Trifolium pratense
Tp57577_TGAC_v2_gene3239 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_82: 83225-84224 Trifolium pratense
Tp57577_TGAC_v2_gene3239 1.0kb downstream 1.0kb downstream 5208 true Tp57577_TGAC_v2_scaf_82: 84225-89432 Trifolium pratense
Tp57577_TGAC_v2_gene3239 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_82: 88433-89432 Trifolium pratense
Tp57577_TGAC_v2_gene3239 2.0kb upstream 2.0kb upstream 6208 true Tp57577_TGAC_v2_scaf_82: 82225-88432 Trifolium pratense
Tp57577_TGAC_v2_gene3239 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_82: 82225-84224 Trifolium pratense
Tp57577_TGAC_v2_gene3239 2.0kb downstream 2.0kb downstream 6208 true Tp57577_TGAC_v2_scaf_82: 84225-90432 Trifolium pratense
Tp57577_TGAC_v2_gene3239 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_82: 88433-90432 Trifolium pratense
Tp57577_TGAC_v2_gene3239 5.0kb upstream 5.0kb upstream 9208 true Tp57577_TGAC_v2_scaf_82: 79225-88432 Trifolium pratense
Tp57577_TGAC_v2_gene3239 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_82: 79225-84224 Trifolium pratense
Tp57577_TGAC_v2_gene3239 5.0kb downstream 5.0kb downstream 9208 true Tp57577_TGAC_v2_scaf_82: 84225-93432 Trifolium pratense
Tp57577_TGAC_v2_gene3239 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_82: 88433-93432 Trifolium pratense
Tp57577_TGAC_v2_gene3239 10.0kb upstream 10.0kb upstream 14208 true Tp57577_TGAC_v2_scaf_82: 74225-88432 Trifolium pratense
Tp57577_TGAC_v2_gene3239 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_82: 74225-84224 Trifolium pratense
Tp57577_TGAC_v2_gene3239 10.0kb downstream 10.0kb downstream 14208 true Tp57577_TGAC_v2_scaf_82: 84225-98432 Trifolium pratense
Tp57577_TGAC_v2_gene3239 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_82: 88433-98432 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299061 5265 Fabidae View MSA
124062440 5270 Rosid View MSA
123739159 5271 Pentapetalae View MSA
122789727 5272 Eudicot View MSA
122050497 5273 Angiosperm View MSA
121311946 5274 Embryophyte View MSA
123349171 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain