Gene : Tp57577_TGAC_v2_gene3249 T. pratense v2
Defline:  (1 of 3) PTHR15245:SF11 - PHOSPHATIDYLINOSITOL 3-KINASE-RELATED PROTEIN KINASE Genomic Order:  29
Name:  ? Tp57577_TGAC_v2_gene3249 Secondary Identifier:  ? PAC:35958729
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6351 Trifolium pratense pathologic  
Tpratense PWY-6352 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3249 0.5kb upstream 0.5kb upstream 5255 true Tp57577_TGAC_v2_scaf_82: 181813-187067 Trifolium pratense
Tp57577_TGAC_v2_gene3249 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_82: 181813-182312 Trifolium pratense
Tp57577_TGAC_v2_gene3249 0.5kb downstream 0.5kb downstream 5255 true Tp57577_TGAC_v2_scaf_82: 182313-187567 Trifolium pratense
Tp57577_TGAC_v2_gene3249 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_82: 187068-187567 Trifolium pratense
Tp57577_TGAC_v2_gene3249 1.0kb upstream 1.0kb upstream 5755 true Tp57577_TGAC_v2_scaf_82: 181313-187067 Trifolium pratense
Tp57577_TGAC_v2_gene3249 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_82: 181313-182312 Trifolium pratense
Tp57577_TGAC_v2_gene3249 1.0kb downstream 1.0kb downstream 5755 true Tp57577_TGAC_v2_scaf_82: 182313-188067 Trifolium pratense
Tp57577_TGAC_v2_gene3249 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_82: 187068-188067 Trifolium pratense
Tp57577_TGAC_v2_gene3249 2.0kb upstream 2.0kb upstream 6755 true Tp57577_TGAC_v2_scaf_82: 180313-187067 Trifolium pratense
Tp57577_TGAC_v2_gene3249 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_82: 180313-182312 Trifolium pratense
Tp57577_TGAC_v2_gene3249 2.0kb downstream 2.0kb downstream 6755 true Tp57577_TGAC_v2_scaf_82: 182313-189067 Trifolium pratense
Tp57577_TGAC_v2_gene3249 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_82: 187068-189067 Trifolium pratense
Tp57577_TGAC_v2_gene3249 5.0kb upstream 5.0kb upstream 9755 true Tp57577_TGAC_v2_scaf_82: 177313-187067 Trifolium pratense
Tp57577_TGAC_v2_gene3249 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_82: 177313-182312 Trifolium pratense
Tp57577_TGAC_v2_gene3249 5.0kb downstream 5.0kb downstream 9755 true Tp57577_TGAC_v2_scaf_82: 182313-192067 Trifolium pratense
Tp57577_TGAC_v2_gene3249 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_82: 187068-192067 Trifolium pratense
Tp57577_TGAC_v2_gene3249 10.0kb upstream 10.0kb upstream 14755 true Tp57577_TGAC_v2_scaf_82: 172313-187067 Trifolium pratense
Tp57577_TGAC_v2_gene3249 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_82: 172313-182312 Trifolium pratense
Tp57577_TGAC_v2_gene3249 10.0kb downstream 10.0kb downstream 14755 true Tp57577_TGAC_v2_scaf_82: 182313-197067 Trifolium pratense
Tp57577_TGAC_v2_gene3249 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_82: 187068-197067 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302159 5265 Fabidae View MSA
124070086 5270 Rosid View MSA
123627897 5271 Pentapetalae View MSA
122662231 5272 Eudicot View MSA
122050959 5273 Angiosperm View MSA
121351687 5274 Embryophyte View MSA
123427554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain