Gene : Tp57577_TGAC_v2_gene4855 T. pratense v2
Defline:  (1 of 2) K01883 - cysteinyl-tRNA synthetase (CARS, cysS) Genomic Order:  829
Name:  ? Tp57577_TGAC_v2_gene4855 Secondary Identifier:  ? PAC:35980378
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRNA-CHARGING-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4855 0.5kb upstream 0.5kb upstream 11972 true Tp57577_TGAC_v2_LG1: 6463932-6475903 Trifolium pratense
Tp57577_TGAC_v2_gene4855 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 6475404-6475903 Trifolium pratense
Tp57577_TGAC_v2_gene4855 0.5kb downstream 0.5kb downstream 11972 true Tp57577_TGAC_v2_LG1: 6463432-6475403 Trifolium pratense
Tp57577_TGAC_v2_gene4855 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 6463432-6463931 Trifolium pratense
Tp57577_TGAC_v2_gene4855 1.0kb upstream 1.0kb upstream 12472 true Tp57577_TGAC_v2_LG1: 6463932-6476403 Trifolium pratense
Tp57577_TGAC_v2_gene4855 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 6475404-6476403 Trifolium pratense
Tp57577_TGAC_v2_gene4855 1.0kb downstream 1.0kb downstream 12472 true Tp57577_TGAC_v2_LG1: 6462932-6475403 Trifolium pratense
Tp57577_TGAC_v2_gene4855 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 6462932-6463931 Trifolium pratense
Tp57577_TGAC_v2_gene4855 2.0kb upstream 2.0kb upstream 13472 true Tp57577_TGAC_v2_LG1: 6463932-6477403 Trifolium pratense
Tp57577_TGAC_v2_gene4855 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 6475404-6477403 Trifolium pratense
Tp57577_TGAC_v2_gene4855 2.0kb downstream 2.0kb downstream 13472 true Tp57577_TGAC_v2_LG1: 6461932-6475403 Trifolium pratense
Tp57577_TGAC_v2_gene4855 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 6461932-6463931 Trifolium pratense
Tp57577_TGAC_v2_gene4855 5.0kb upstream 5.0kb upstream 16472 true Tp57577_TGAC_v2_LG1: 6463932-6480403 Trifolium pratense
Tp57577_TGAC_v2_gene4855 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 6475404-6480403 Trifolium pratense
Tp57577_TGAC_v2_gene4855 5.0kb downstream 5.0kb downstream 16472 true Tp57577_TGAC_v2_LG1: 6458932-6475403 Trifolium pratense
Tp57577_TGAC_v2_gene4855 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 6458932-6463931 Trifolium pratense
Tp57577_TGAC_v2_gene4855 10.0kb upstream 10.0kb upstream 21472 true Tp57577_TGAC_v2_LG1: 6463932-6485403 Trifolium pratense
Tp57577_TGAC_v2_gene4855 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 6475404-6485403 Trifolium pratense
Tp57577_TGAC_v2_gene4855 10.0kb downstream 10.0kb downstream 21472 true Tp57577_TGAC_v2_LG1: 6453932-6475403 Trifolium pratense
Tp57577_TGAC_v2_gene4855 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 6453932-6463931 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306399 5265 Fabidae View MSA
124063129 5270 Rosid View MSA
123736819 5271 Pentapetalae View MSA
122791424 5272 Eudicot View MSA
122050932 5273 Angiosperm View MSA
121350340 5274 Embryophyte View MSA
123427761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain