Gene : Tp57577_TGAC_v2_gene18843 T. pratense v2
Defline:  (1 of 1) PF00199//PF00501//PF00550 - Catalase (Catalase) // AMP-binding enzyme (AMP-binding) // Phosphopantetheine attachment site (PP-binding) Genomic Order:  38
Name:  ? Tp57577_TGAC_v2_gene18843 Secondary Identifier:  ? PAC:35954288
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene18843 0.5kb upstream 0.5kb upstream 5805 true Tp57577_TGAC_v2_scaf_307: 227036-232840 Trifolium pratense
Tp57577_TGAC_v2_gene18843 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_307: 227036-227535 Trifolium pratense
Tp57577_TGAC_v2_gene18843 0.5kb downstream 0.5kb downstream 5805 true Tp57577_TGAC_v2_scaf_307: 227536-233340 Trifolium pratense
Tp57577_TGAC_v2_gene18843 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_307: 232841-233340 Trifolium pratense
Tp57577_TGAC_v2_gene18843 1.0kb upstream 1.0kb upstream 6305 true Tp57577_TGAC_v2_scaf_307: 226536-232840 Trifolium pratense
Tp57577_TGAC_v2_gene18843 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_307: 226536-227535 Trifolium pratense
Tp57577_TGAC_v2_gene18843 1.0kb downstream 1.0kb downstream 6305 true Tp57577_TGAC_v2_scaf_307: 227536-233840 Trifolium pratense
Tp57577_TGAC_v2_gene18843 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_307: 232841-233840 Trifolium pratense
Tp57577_TGAC_v2_gene18843 2.0kb upstream 2.0kb upstream 7305 true Tp57577_TGAC_v2_scaf_307: 225536-232840 Trifolium pratense
Tp57577_TGAC_v2_gene18843 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_307: 225536-227535 Trifolium pratense
Tp57577_TGAC_v2_gene18843 2.0kb downstream 2.0kb downstream 7305 true Tp57577_TGAC_v2_scaf_307: 227536-234840 Trifolium pratense
Tp57577_TGAC_v2_gene18843 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_307: 232841-234840 Trifolium pratense
Tp57577_TGAC_v2_gene18843 5.0kb upstream 5.0kb upstream 10305 true Tp57577_TGAC_v2_scaf_307: 222536-232840 Trifolium pratense
Tp57577_TGAC_v2_gene18843 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_307: 222536-227535 Trifolium pratense
Tp57577_TGAC_v2_gene18843 5.0kb downstream 5.0kb downstream 10305 true Tp57577_TGAC_v2_scaf_307: 227536-237840 Trifolium pratense
Tp57577_TGAC_v2_gene18843 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_307: 232841-237840 Trifolium pratense
Tp57577_TGAC_v2_gene18843 10.0kb upstream 10.0kb upstream 15305 true Tp57577_TGAC_v2_scaf_307: 217536-232840 Trifolium pratense
Tp57577_TGAC_v2_gene18843 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_307: 217536-227535 Trifolium pratense
Tp57577_TGAC_v2_gene18843 10.0kb downstream 10.0kb downstream 15305 true Tp57577_TGAC_v2_scaf_307: 227536-242840 Trifolium pratense
Tp57577_TGAC_v2_gene18843 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_307: 232841-242840 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309922 5265 Fabidae View MSA
124070330 5270 Rosid View MSA
123742456 5271 Pentapetalae View MSA
122795163 5272 Eudicot View MSA
122048169 5273 Angiosperm View MSA
121310872 5274 Embryophyte View MSA
123426250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain