Gene : Tp57577_TGAC_v2_gene4839 T. pratense v2
Defline:  (1 of 2) PTHR12526:SF304 - STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED Genomic Order:  864
Name:  ? Tp57577_TGAC_v2_gene4839 Secondary Identifier:  ? PAC:35978322
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4839 0.5kb upstream 0.5kb upstream 7796 true Tp57577_TGAC_v2_LG1: 6687138-6694933 Trifolium pratense
Tp57577_TGAC_v2_gene4839 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 6694434-6694933 Trifolium pratense
Tp57577_TGAC_v2_gene4839 0.5kb downstream 0.5kb downstream 7796 true Tp57577_TGAC_v2_LG1: 6686638-6694433 Trifolium pratense
Tp57577_TGAC_v2_gene4839 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 6686638-6687137 Trifolium pratense
Tp57577_TGAC_v2_gene4839 1.0kb upstream 1.0kb upstream 8296 true Tp57577_TGAC_v2_LG1: 6687138-6695433 Trifolium pratense
Tp57577_TGAC_v2_gene4839 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 6694434-6695433 Trifolium pratense
Tp57577_TGAC_v2_gene4839 1.0kb downstream 1.0kb downstream 8296 true Tp57577_TGAC_v2_LG1: 6686138-6694433 Trifolium pratense
Tp57577_TGAC_v2_gene4839 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 6686138-6687137 Trifolium pratense
Tp57577_TGAC_v2_gene4839 2.0kb upstream 2.0kb upstream 9296 true Tp57577_TGAC_v2_LG1: 6687138-6696433 Trifolium pratense
Tp57577_TGAC_v2_gene4839 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 6694434-6696433 Trifolium pratense
Tp57577_TGAC_v2_gene4839 2.0kb downstream 2.0kb downstream 9296 true Tp57577_TGAC_v2_LG1: 6685138-6694433 Trifolium pratense
Tp57577_TGAC_v2_gene4839 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 6685138-6687137 Trifolium pratense
Tp57577_TGAC_v2_gene4839 5.0kb upstream 5.0kb upstream 12296 true Tp57577_TGAC_v2_LG1: 6687138-6699433 Trifolium pratense
Tp57577_TGAC_v2_gene4839 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 6694434-6699433 Trifolium pratense
Tp57577_TGAC_v2_gene4839 5.0kb downstream 5.0kb downstream 12296 true Tp57577_TGAC_v2_LG1: 6682138-6694433 Trifolium pratense
Tp57577_TGAC_v2_gene4839 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 6682138-6687137 Trifolium pratense
Tp57577_TGAC_v2_gene4839 10.0kb upstream 10.0kb upstream 17296 true Tp57577_TGAC_v2_LG1: 6687138-6704433 Trifolium pratense
Tp57577_TGAC_v2_gene4839 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 6694434-6704433 Trifolium pratense
Tp57577_TGAC_v2_gene4839 10.0kb downstream 10.0kb downstream 17296 true Tp57577_TGAC_v2_LG1: 6677138-6694433 Trifolium pratense
Tp57577_TGAC_v2_gene4839 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 6677138-6687137 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301752 5265 Fabidae View MSA
124062542 5270 Rosid View MSA
123737586 5271 Pentapetalae View MSA
122786746 5272 Eudicot View MSA
122042885 5273 Angiosperm View MSA
121344527 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain