Gene : Tp57577_TGAC_v2_gene4835 T. pratense v2
Defline:  (1 of 1) PF16669 - Tetratricopeptide repeat protein 5 OB fold domain (TTC5_OB) Genomic Order:  763
Name:  ? Tp57577_TGAC_v2_gene4835 Secondary Identifier:  ? PAC:35978690
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4835 0.5kb upstream 0.5kb upstream 8884 true Tp57577_TGAC_v2_LG1: 6031067-6039950 Trifolium pratense
Tp57577_TGAC_v2_gene4835 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 6031067-6031566 Trifolium pratense
Tp57577_TGAC_v2_gene4835 0.5kb downstream 0.5kb downstream 8884 true Tp57577_TGAC_v2_LG1: 6031567-6040450 Trifolium pratense
Tp57577_TGAC_v2_gene4835 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 6039951-6040450 Trifolium pratense
Tp57577_TGAC_v2_gene4835 1.0kb upstream 1.0kb upstream 9384 true Tp57577_TGAC_v2_LG1: 6030567-6039950 Trifolium pratense
Tp57577_TGAC_v2_gene4835 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 6030567-6031566 Trifolium pratense
Tp57577_TGAC_v2_gene4835 1.0kb downstream 1.0kb downstream 9384 true Tp57577_TGAC_v2_LG1: 6031567-6040950 Trifolium pratense
Tp57577_TGAC_v2_gene4835 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 6039951-6040950 Trifolium pratense
Tp57577_TGAC_v2_gene4835 2.0kb upstream 2.0kb upstream 10384 true Tp57577_TGAC_v2_LG1: 6029567-6039950 Trifolium pratense
Tp57577_TGAC_v2_gene4835 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 6029567-6031566 Trifolium pratense
Tp57577_TGAC_v2_gene4835 2.0kb downstream 2.0kb downstream 10384 true Tp57577_TGAC_v2_LG1: 6031567-6041950 Trifolium pratense
Tp57577_TGAC_v2_gene4835 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 6039951-6041950 Trifolium pratense
Tp57577_TGAC_v2_gene4835 5.0kb upstream 5.0kb upstream 13384 true Tp57577_TGAC_v2_LG1: 6026567-6039950 Trifolium pratense
Tp57577_TGAC_v2_gene4835 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 6026567-6031566 Trifolium pratense
Tp57577_TGAC_v2_gene4835 5.0kb downstream 5.0kb downstream 13384 true Tp57577_TGAC_v2_LG1: 6031567-6044950 Trifolium pratense
Tp57577_TGAC_v2_gene4835 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 6039951-6044950 Trifolium pratense
Tp57577_TGAC_v2_gene4835 10.0kb upstream 10.0kb upstream 18384 true Tp57577_TGAC_v2_LG1: 6021567-6039950 Trifolium pratense
Tp57577_TGAC_v2_gene4835 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 6021567-6031566 Trifolium pratense
Tp57577_TGAC_v2_gene4835 10.0kb downstream 10.0kb downstream 18384 true Tp57577_TGAC_v2_LG1: 6031567-6049950 Trifolium pratense
Tp57577_TGAC_v2_gene4835 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 6039951-6049950 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305603 5265 Fabidae View MSA
124069629 5270 Rosid View MSA
123742575 5271 Pentapetalae View MSA
122794271 5272 Eudicot View MSA
122048209 5273 Angiosperm View MSA
121349212 5274 Embryophyte View MSA
123425821 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain