Gene : Tp57577_TGAC_v2_gene38832 T. pratense v2
Defline:  (1 of 8) PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) Genomic Order:  2119
Name:  ? Tp57577_TGAC_v2_gene38832 Secondary Identifier:  ? PAC:35980569
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38832 0.5kb upstream 0.5kb upstream 2453 true Tp57577_TGAC_v2_LG1: 17915737-17918189 Trifolium pratense
Tp57577_TGAC_v2_gene38832 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 17915737-17916236 Trifolium pratense
Tp57577_TGAC_v2_gene38832 0.5kb downstream 0.5kb downstream 2453 true Tp57577_TGAC_v2_LG1: 17916237-17918689 Trifolium pratense
Tp57577_TGAC_v2_gene38832 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 17918190-17918689 Trifolium pratense
Tp57577_TGAC_v2_gene38832 1.0kb upstream 1.0kb upstream 2953 true Tp57577_TGAC_v2_LG1: 17915237-17918189 Trifolium pratense
Tp57577_TGAC_v2_gene38832 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 17915237-17916236 Trifolium pratense
Tp57577_TGAC_v2_gene38832 1.0kb downstream 1.0kb downstream 2953 true Tp57577_TGAC_v2_LG1: 17916237-17919189 Trifolium pratense
Tp57577_TGAC_v2_gene38832 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 17918190-17919189 Trifolium pratense
Tp57577_TGAC_v2_gene38832 2.0kb upstream 2.0kb upstream 3953 true Tp57577_TGAC_v2_LG1: 17914237-17918189 Trifolium pratense
Tp57577_TGAC_v2_gene38832 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 17914237-17916236 Trifolium pratense
Tp57577_TGAC_v2_gene38832 2.0kb downstream 2.0kb downstream 3953 true Tp57577_TGAC_v2_LG1: 17916237-17920189 Trifolium pratense
Tp57577_TGAC_v2_gene38832 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 17918190-17920189 Trifolium pratense
Tp57577_TGAC_v2_gene38832 5.0kb upstream 5.0kb upstream 6953 true Tp57577_TGAC_v2_LG1: 17911237-17918189 Trifolium pratense
Tp57577_TGAC_v2_gene38832 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 17911237-17916236 Trifolium pratense
Tp57577_TGAC_v2_gene38832 5.0kb downstream 5.0kb downstream 6953 true Tp57577_TGAC_v2_LG1: 17916237-17923189 Trifolium pratense
Tp57577_TGAC_v2_gene38832 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 17918190-17923189 Trifolium pratense
Tp57577_TGAC_v2_gene38832 10.0kb upstream 10.0kb upstream 11953 true Tp57577_TGAC_v2_LG1: 17906237-17918189 Trifolium pratense
Tp57577_TGAC_v2_gene38832 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 17906237-17916236 Trifolium pratense
Tp57577_TGAC_v2_gene38832 10.0kb downstream 10.0kb downstream 11953 true Tp57577_TGAC_v2_LG1: 17916237-17928189 Trifolium pratense
Tp57577_TGAC_v2_gene38832 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 17918190-17928189 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315046 5265 Fabidae View MSA
124065219 5270 Rosid View MSA
123752107 5271 Pentapetalae View MSA
122792098 5272 Eudicot View MSA
122049836 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121345556 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain